RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
VPS33B-203ENST00000554264 DCTPP1Q9H773 170 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 CBX8Q9HC52 389 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 DDX21Q9NR30 783 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS33B-203ENST00000554264 RAD18Q9NS91 495 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 VTI1BQ9UEU0 232 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 ZNF652Q9Y2D9 606 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 ACTL7BQ9Y614 415 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
VPS33B-203ENST00000554264 SLX4Q8IY92 1834 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 ARFGEF2Q9Y6D5 1785 aa7.08□□□□□ -1.28
VPS33B-203ENST00000554264 GNAT3A8MTJ3 354 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 SART1O43290 800 aaKnown RBP7.07□□□□□ -1.28
VPS33B-203ENST00000554264 CA12O43570 354 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 BAG4O95429 457 aaKnown RBP7.07□□□□□ -1.28
VPS33B-203ENST00000554264 A1BGP04217 495 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 ALDH1B1P30837 517 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 MAP2K2P36507 400 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 EIF6P56537 245 aaKnown RBP7.07□□□□□ -1.28
VPS33B-203ENST00000554264 ANAPC15P60006 121 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 CCDC85BQ15834 202 aaPredicted RBP7.07□□□□□ -1.28
VPS33B-203ENST00000554264 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 TTC22Q5TAA0 569 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 FAM184AQ8NB25 1140 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 GPR101Q96P66 508 aaPredicted RBP7.07□□□□□ -1.28
VPS33B-203ENST00000554264 PSMD1Q99460 953 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 KIF2CQ99661 725 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 CHMP4AQ9BY43 222 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 KRT82Q9NSB4 513 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 FAM105AQ9NUU6 356 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 TNNQ9UQP3 1299 aa7.07□□□□□ -1.28
VPS33B-203ENST00000554264 THSD7BQ9C0I4 1608 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 HMX2A2RU54 273 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 F6X3S4 739 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 ZNF500O60304 480 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-203ENST00000554264 PRKAR2BP31323 418 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 MAP3K11Q16584 847 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 TWISTNBQ3B726 338 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-203ENST00000554264 PRSS36Q5K4E3 855 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 TRIM42Q8IWZ5 723 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 SYNE4Q8N205 404 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 ANKRD44Q8N8A2 993 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 IL17RAQ96F46 866 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 CRELD1Q96HD1 420 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 INTS4Q96HW7 963 aaKnown RBP7.06□□□□□ -1.28
VPS33B-203ENST00000554264 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 PANK2Q9BZ23 570 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 CCDC39Q9UFE4 941 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 RAXQ9Y2V3 346 aa7.06□□□□□ -1.28
VPS33B-203ENST00000554264 AOX1Q06278 1338 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 SYNGAP1Q96PV0 1343 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 DHX15O43143 795 aaKnown RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 LETM1O95202 739 aaPredicted RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 ST13P50502 369 aaKnown RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 GRM1Q13255 1194 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 TTBK2Q6IQ55 1244 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 LLGL2Q6P1M3 1020 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 USP50Q70EL3 339 aaPredicted RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 DYMQ7RTS9 669 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 SHISA5Q8N114 240 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 IL17REQ8NFR9 667 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 FBLIM1Q8WUP2 373 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 PDLIM2Q96JY6 352 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 C7orf69Q9H7B7 122 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 DISC1Q9NRI5 854 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 CRIM1Q9NZV1 1036 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 STOML1Q9UBI4 398 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 NOL7Q9UMY1 257 aaKnown RBP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 CYP8B1Q9UNU6 501 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 NIP7Q9Y221 180 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS33B-203ENST00000554264 PCDHB5Q9Y5E4 795 aa7.05□□□□□ -1.28
VPS33B-203ENST00000554264 UNCXA6NJT0 531 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 BTBD11A6QL63 1104 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 ERC2O15083 957 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 TPM3P06753 285 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 SNRPA1P09661 255 aaKnown RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 NCLP19338 710 aaKnown RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 CDK8P49336 464 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 LIG3P49916 1009 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 CCT4P50991 539 aaKnown RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 OLFM4Q6UX06 510 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 BEND4Q6ZU67 534 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 HHIPL1Q96JK4 782 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 FANCD2OSQ96PS1 177 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 FAM83CQ9BQN1 747 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 NOC4LQ9BVI4 516 aaKnown RBP7.04□□□□□ -1.28
VPS33B-203ENST00000554264 MCOLN1Q9GZU1 580 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 TLR6Q9Y2C9 796 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 BCORQ6W2J9 1755 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 CEMIPQ8WUJ3 1361 aa7.04□□□□□ -1.28
VPS33B-203ENST00000554264 NFICP08651 508 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms