RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 PIH1D3Q9NQM4 214 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 ERVV-1B6SEH8 477 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 PCDHB6Q9Y5E3 794 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 LIG4P49917 911 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 GUCY2DQ02846 1103 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 ODF2LQ9ULJ1 636 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 ARMCX5Q6P1M9 558 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 PPM1KQ8N3J5 372 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 UBR1Q8IWV7 1749 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 MAN2A1Q16706 1144 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 LMNTD2Q8IXW0 634 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 BCAS4Q8TDM0 211 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 TRIM37O94972 964 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 SEC31AO94979 1220 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 IFNB1P01574 187 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 NR2F2P24468 414 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 ADCY8P40145 1251 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 MCF2L2Q86YR7 1114 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 ARHGAP24Q8N264 748 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 GLG1Q92896 1179 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 DCCP43146 1447 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 H0YCG3 227 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 P4HA1P13674 534 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 TAF12Q16514 161 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 TBCKQ8TEA7 893 aa16.79■□□□□ 0.28
ARHGEF40-202ENST00000553709 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 PRKG1Q13976 671 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 GEN1Q17RS7 908 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 ABCB5Q2M3G0 1257 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 TTLL1O95922 423 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 RASGRF1Q13972 1273 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 CASC4Q6P4E1 433 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 SPATS2Q86XZ4 545 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 GABPB2Q8TAK5 448 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-202ENST00000553709 SOWAHDA6NJG2 315 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 ANKRD20A3Q5VUR7 823 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 ZNF526Q8TF50 670 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 CCDC127Q96BQ5 260 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 HINFPQ9BQA5 517 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 TRPC6Q9Y210 931 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 FKBP3Q00688 224 aaKnown RBP16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 PAGE5Q96GU1 130 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 KRT12Q99456 494 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-202ENST00000553709 CDC25AP30304 524 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 ACRBPQ8NEB7 543 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 LMNB1P20700 586 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 LRRC41Q15345 812 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 EPHA10Q5JZY3 1008 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 SDCCAG8Q86SQ7 713 aaPredicted RBP16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 PIGSQ96S52 555 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 ST7Q9NRC1 585 aa16.77■□□□□ 0.27
ARHGEF40-202ENST00000553709 DLATP10515 647 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 VPS41P49754 854 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 TSNAXIP1Q2TAA8 658 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 SARM1Q6SZW1 724 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 ATP1A3P13637 1013 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 MYL7Q01449 175 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 PANX2Q96RD6 677 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 TPD52P55327 224 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 AOC3Q16853 763 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 LRCH2Q5VUJ6 765 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 PALM2Q8IXS6 379 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 CAPN7Q9Y6W3 813 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 CCNE1P24864 410 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 PROCA1Q8NCQ7 364 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 TYW1Q9NV66 732 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 BAIAP2L1Q9UHR4 511 aa16.76■□□□□ 0.27
ARHGEF40-202ENST00000553709 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms