RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PHKG2P15735 406 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 GARTP22102 1010 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 EIF4A3P38919 411 aaKnown RBP8.1□□□□□ -1.11
ATXN3-223ENST00000553686 PRKCQQ04759 706 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 AOC3Q16853 763 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 GPC2Q8N158 579 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 FBXO27Q8NI29 283 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-223ENST00000553686 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-223ENST00000553686 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 INSRP06213 1382 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 KDRP35968 1356 aa8.1□□□□□ -1.11
ATXN3-223ENST00000553686 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 RNF123Q5XPI4 1314 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 UBR3Q6ZT12 1888 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 ARFGEF1Q9Y6D6 1849 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
ATXN3-223ENST00000553686 HSP90AB2PQ58FF8 381 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 SFRP5Q5T4F7 317 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-223ENST00000553686 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-223ENST00000553686 CDH24Q86UP0 819 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-223ENST00000553686 HRASLS5Q96KN8 279 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 NARFQ9UHQ1 456 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 MAPK8IP1Q9UQF2 711 aa8.09□□□□□ -1.11
ATXN3-223ENST00000553686 FZD9O00144 591 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 GREM1O60565 184 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 CELF2O95319 508 aaKnown RBP8.08□□□□□ -1.12
ATXN3-223ENST00000553686 MPP2Q14168 576 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 CCDC93Q567U6 631 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 STYK1Q6J9G0 422 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 AGBL5Q8NDL9 886 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 PUS7Q96PZ0 661 aaKnown RBP8.08□□□□□ -1.12
ATXN3-223ENST00000553686 TNKS2Q9H2K2 1166 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 ADGRE2Q9UHX3 823 aa8.08□□□□□ -1.12
ATXN3-223ENST00000553686 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-223ENST00000553686 SUPT16HQ9Y5B9 1047 aaKnown RBP8.08□□□□□ -1.12
ATXN3-223ENST00000553686 PRR33A8MZF0 331 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 CBX7O95931 251 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 CD8BP10966 210 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 CD96P40200 585 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 SPACA3Q8IXA5 215 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 RTKN2Q8IZC4 609 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF541Q9H0D2 1346 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 FAM155AB1AL88 458 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-223ENST00000553686 TRAF5O00463 557 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 NPHP1O15259 732 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 CYP7A1P22680 504 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 EIF6P56537 245 aaKnown RBP8.06□□□□□ -1.12
ATXN3-223ENST00000553686 CWF19L2Q2TBE0 894 aaKnown RBP8.06□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-223ENST00000553686 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 ADAMTS1Q9UHI8 967 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
ATXN3-223ENST00000553686 RBAK-RBAKDNI3L0D1 243 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 HTR3BO95264 441 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 TAL1P17542 331 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF76P36508 570 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
ATXN3-223ENST00000553686 PLCL1Q15111 1095 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 WFDC3Q8IUB2 231 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 ASB11Q8WXH4 323 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-223ENST00000553686 RNF186Q9NXI6 227 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 FLT4P35916 1363 aa8.05□□□□□ -1.12
ATXN3-223ENST00000553686 VIRMAQ69YN4 1812 aaKnown RBP8.04□□□□□ -1.12
ATXN3-223ENST00000553686 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 SRGNP10124 158 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 IARSP41252 1262 aaKnown RBP8.04□□□□□ -1.12
ATXN3-223ENST00000553686 EPS15P42566 896 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 CDKAL1Q5VV42 579 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 MCTP1Q6DN14 999 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 HSPA12BQ96MM6 686 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 TONSLQ96HA7 1378 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 FAM208AQ9UK61 1670 aaKnown RBP8.04□□□□□ -1.12
ATXN3-223ENST00000553686 SBF1O95248 1867 aa8.04□□□□□ -1.12
ATXN3-223ENST00000553686 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-223ENST00000553686 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 BRCA1P38398 1863 aaKnown RBP8.03□□□□□ -1.12
ATXN3-223ENST00000553686 A0A087WZG4 1122 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 FYB1O15117 783 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 ZNF865P0CJ78 1059 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-223ENST00000553686 ETV3P41162 512 aa8.03□□□□□ -1.12
ATXN3-223ENST00000553686 CLCN7P51798 805 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms