RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 KRT86O43790 486 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PFKFB2O60825 505 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SUN1O94901 812 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 KLC3Q6P597 504 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 MEIS3Q99687 375 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TBC1D23Q9NUY8 699 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 THEGQ9P2T0 379 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 ATP9AO75110 1047 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PSME1Q06323 249 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 WTAPQ15007 396 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SF3B3Q15393 1217 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 RSRC2Q7L4I2 434 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 ERICH1Q86X53 443 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SAMD3Q8N6K7 520 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 ZFYVE19Q96K21 471 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SPEF1Q9Y4P9 236 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SNTNA6NMZ2 147 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PRKACAP17612 351 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 FBLN1P23142 703 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 ACAP1Q15027 740 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 C10orf62Q5T681 223 aaPredicted RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 MAP3K21Q5TCX8 1036 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 NLRP9Q7RTR0 991 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 GDAP1Q8TB36 358 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 FAM129AQ9BZQ8 928 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TRIM39Q9HCM9 518 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ENO2P09104 434 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ATP6V1B1P15313 513 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 PDE1AP54750 535 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 C15orf59Q2T9L4 293 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 FNBP1Q96RU3 617 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 DPH5Q9H2P9 285 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 TCP11L1Q9NUJ3 509 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 CFAP73A6NFT4 308 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 HIP1O00291 1037 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 BUB1O43683 1085 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 LMNAP02545 664 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 LRPAP1P30533 357 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SERPINB6P35237 376 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SMUG1Q53HV7 270 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SPICE1Q8N0Z3 855 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ARHGAP42A6NI28 874 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 PTGS2P35354 604 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 DDIT3P35638 169 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SLCO1A2P46721 670 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 MYL5Q02045 173 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 INTS9Q9NV88 658 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 DNAJC17Q9NVM6 304 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 STOML1Q9UBI4 398 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 CTNND2Q9UQB3 1225 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 RPS6KA5O75582 802 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 HAUS5O94927 633 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 IFNA8P32881 189 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ERMNQ8TAM6 284 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SCHIP1Q9P0W5 487 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 GNAT3A8MTJ3 354 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 SOX11P35716 441 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 TRIM33Q9UPN9 1127 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 KANK1Q14678 1352 aa9.78□□□□□ -0.84
GTF2A1-203ENST00000553612 MDH1P40925 334 aaKnown RBP9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 AKR1D1P51857 326 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 ZCWPW2Q504Y3 356 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 SLC7A5P1Q8MH63 180 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 PHF12Q96QT6 1004 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 KRT82Q9NSB4 513 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 ACSL4O60488 711 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 KRT18P05783 430 aaKnown RBP9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 MDM2Q00987 491 aaPredicted RBP9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 SDR16C5Q8N3Y7 309 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 LRRC45Q96CN5 670 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 TRIM47Q96LD4 638 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 SYNPO2Q9UMS6 1093 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 EXOC7Q9UPT5 735 aa9.77□□□□□ -0.84
GTF2A1-203ENST00000553612 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 OCM2P0CE71 109 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 OCMP0CE72 109 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 UAP1Q16222 522 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 AGAP9Q5VTM2 703 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 NME9Q86XW9 330 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms