RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 INHAP05111 366 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 ETFBP38117 255 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 EIF5P55010 431 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 FANCCQ00597 558 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 POU4F2Q12837 409 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TTC22Q5TAA0 569 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 EGFLAMQ63HQ2 1017 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 RIPOR1Q6ZS17 1223 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 RSRC2Q7L4I2 434 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 TMEM110Q86TL2 294 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 FBXO18Q8NFZ0 1043 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CHAC2Q8WUX2 184 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 GAS2L1Q99501 681 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 LRRC27Q9C0I9 530 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 UBP1Q9NZI7 540 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CXXC1Q9P0U4 656 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 GPN3Q9UHW5 284 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 ZNF180Q9UJW8 692 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TPX2Q9ULW0 747 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 MAGED2Q9UNF1 606 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 ITM2BQ9Y287 266 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TTC41PQ6P2S7 1318 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CARMIL3Q8ND23 1372 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 FAM221BA6H8Z2 402 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 KIF5CO60282 957 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 COL6A1P12109 1028 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 HSD3B2P26439 372 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CCNHP51946 323 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 PTPN21Q16825 1174 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 ARSJQ5FYB0 599 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 KRT25Q7Z3Z0 450 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 RAVER1Q8IY67 606 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 CHPFQ8IZ52 775 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 IFNL2Q8IZJ0 200 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 XAGE2Q96GT9 111 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 SLC39A13Q96H72 371 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 KAZALD1Q96I82 304 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 FAXDC2Q96IV6 333 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 KIF9Q9HAQ2 790 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TIMMDC1Q9NPL8 285 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 VPS45Q9NRW7 570 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 KLK14Q9P0G3 267 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 BLOC1S6Q9UL45 172 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 POLIQ9UNA4 740 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 BICDL2A1A5D9 508 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CDC14CA4D256 554 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 FIBPO43427 364 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 IL2RAP01589 272 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 USP17L7P0C7H9 530 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 GSPT1P15170 499 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 CPEP16870 476 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 PTSQ03393 145 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CCDC70Q6NSX1 233 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ZNF790Q6PG37 636 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 FAM114A1Q8IWE2 563 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 KDF1Q8NAX2 398 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SLC7A3Q8WY07 619 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ZNF512BQ96KM6 892 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 C16orf45Q96MC5 204 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 TNS1Q9HBL0 1735 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 TSPYL4Q9UJ04 414 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CDHR2Q9BYE9 1310 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 hCG_1642624A0A1W2PR95 340 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 VSTM5A8MXK1 200 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 KRT20P35900 424 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 PHKA2P46019 1235 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 RFX5P48382 616 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 PLCB4Q15147 1175 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 TTF1Q15361 905 aaPredicted RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 KLHL40Q2TBA0 621 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CCDC178Q5BJE1 867 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 MCTP1Q6DN14 999 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CWC27Q6UX04 472 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SAPCD2Q86UD0 394 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 TTC30BQ8N4P2 665 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 PPM1NQ8N819 430 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 MGARPQ8TDB4 240 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 TAF4BQ92750 862 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CLP1Q92989 425 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SMARCE1Q969G3 411 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 CRELD1Q96HD1 420 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 STK31Q9BXU1 1019 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 NIFKQ9BYG3 293 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 UNC45AQ9H3U1 944 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 SUN2Q9UH99 717 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ENO4A6NNW6 628 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 TERTO14746 1132 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 SASH1O94885 1247 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 GCFC2P16383 781 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 CDC27P30260 824 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 RAB27AP51159 221 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 SESN3P58005 492 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 ELF2Q15723 593 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 RRP12Q5JTH9 1297 aaKnown RBP4.52□□□□□ -1.69
RDH11-204ENST00000553578 C16orf46Q6P387 395 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 NXPE4Q6UWF7 544 aa4.52□□□□□ -1.69
RDH11-204ENST00000553578 KIAA1328Q86T90 577 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms