RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 TRAF1Q13077 416 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 TTLL4Q14679 1199 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 TMEM63BQ5T3F8 832 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 IWS1Q96ST2 819 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 AMNQ9BXJ7 453 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 RAPGEFL1Q9UHV5 662 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 GRIN2DO15399 1336 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 TXNP10599 105 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 CSF2RAP15509 400 aa17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 PSMC6P62333 389 aa17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 PTH1RQ03431 593 aa17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 SYTL5Q8TDW5 730 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 MTG1Q9BT17 334 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-205ENST00000553546 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 B4GALT4O60513 344 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 MYL3P08590 195 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 SUPT20HL2P0C7V6 817 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 STXBP2Q15833 593 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 STAG2Q8N3U4 1231 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 SAMD3Q8N6K7 520 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 RMDN3Q96TC7 470 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 ALDH8A1Q9H2A2 487 aaPredicted RBP17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 MTIF3Q9H2K0 278 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 IL23AQ9NPF7 189 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 MAD2L2Q9UI95 211 aa17.6■□□□□ 0.41
SDR39U1-205ENST00000553546 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 PALM3A6NDB9 673 aaPredicted RBP17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 A6NJR5 290 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 E7EWF7 191 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 ZBTB5O15062 677 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 FOSL2P15408 326 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 CYP2C18P33260 490 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 GHRHRQ02643 423 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 WTAPQ15007 396 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 ARHGEF16Q5VV41 709 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 MTMR8Q96EF0 704 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
SDR39U1-205ENST00000553546 CFBP00751 764 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 GRM4Q14833 912 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 RASIP1Q5U651 963 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 USP38Q8NB14 1042 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 MAP4K1Q92918 833 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 COL20A1Q9P218 1284 aa17.58■□□□□ 0.4
SDR39U1-205ENST00000553546 GH1P01241 217 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 DNAJB2P25686 324 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 HSD17B4P51659 736 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 PTPN11Q06124 597 aaPredicted RBP17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 NFRKBQ6P4R8 1299 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 CCDC62Q6P9F0 684 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 C16orf59Q7L2K0 433 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 COPS5Q92905 334 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 PCDHA1Q9Y5I3 950 aa17.57■□□□□ 0.4
SDR39U1-205ENST00000553546 EIF3JO75822 258 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 ARIH2O95376 493 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 FGBP02675 491 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 ACRP10323 421 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 EIF2AK2P19525 551 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 TMEM67Q5HYA8 995 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 HERVK_113Q902F9 699 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
SDR39U1-205ENST00000553546 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 NR3C2P08235 984 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 PFKMP08237 780 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 CCL23P55773 120 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 TROAPQ12815 778 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 NBPF20Q3BBV1 942 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 HOMER1Q86YM7 354 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 TIFAQ96CG3 184 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 WNT8AQ9H1J5 351 aa17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-205ENST00000553546 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 TNFRSF10AO00220 468 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 OPLAHO14841 1288 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 PPP1R11O60927 126 aaPredicted RBP17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 MMP3P08254 477 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 LY6KQ17RY6 165 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 TJAP1Q5JTD0 557 aa17.54■□□□□ 0.4
SDR39U1-205ENST00000553546 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms