RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 LUZP1Q86V48 1076 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 REXO1Q8N1G1 1221 aaKnown RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 SPATA20Q8TB22 786 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 JDP2Q8WYK2 163 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 MTMR8Q96EF0 704 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 SH2D4AQ9H788 454 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 CCDC88AQ3V6T2 1871 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 MYO5AQ9Y4I1 1855 aaKnown RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 hCG_1642624A0A1W2PR95 340 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 DDTLA6NHG4 134 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 POLR2DO15514 142 aaKnown RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 GOLGA8HP0CJ92 632 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 GCFC2P16383 781 aaKnown RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 SMPD1P17405 629 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 RFC5P40937 340 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 TNNI2P48788 182 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 SARSP49591 514 aaKnown RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 ADCY7P51828 1080 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 ICA1Q05084 483 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 TNFAIP1Q13829 316 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 ABCB5Q2M3G0 1257 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 SLC35G1Q2M3R5 365 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 NEK8Q86SG6 692 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 PLA2G4DQ86XP0 818 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 CYP4X1Q8N118 509 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 C4orf32Q8N8J7 132 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 GPKOWQ92917 476 aaPredicted RBP eCLIP8.28□□□□□ -1.08
ATXN3-221ENST00000553498 SMARCE1Q969G3 411 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 CLIC6Q96NY7 704 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 GSDMAQ96QA5 445 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 PIGSQ96S52 555 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 RAB34Q9BZG1 259 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 TRIM5Q9C035 493 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 RIC8AQ9NPQ8 531 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 KCNQ5Q9NR82 932 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 RMND1Q9NWS8 449 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 MYH13Q9UKX3 1938 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
ATXN3-221ENST00000553498 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PSMD14O00487 310 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 CBFA2T2O43439 604 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PLA2G6O60733 806 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 AVPP01185 164 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ATP2B1P20020 1258 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 MCM7P33993 719 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 SLC1A4P43007 532 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ZNF75DP51815 510 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 MYL5Q02045 173 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 AP3B2Q13367 1082 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ZNF174Q15697 407 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 SLFN13Q68D06 897 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 CIAPIN1Q6FI81 312 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 BTNL9Q6UXG8 535 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 C11orf57Q6ZUT1 292 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 DHX40Q8IX18 779 aaKnown RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ADGRF4Q8IZF3 695 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 LRRC47Q8N1G4 583 aaKnown RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 DPF2Q92785 391 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 CUL5Q93034 780 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 HOOK2Q96ED9 719 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PRMT6Q96LA8 375 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 CCSER1Q9C0I3 900 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 TDRD3Q9H7E2 651 aaKnown RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 DNAJC18Q9H819 358 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 JMJD4Q9H9V9 463 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ARHGEF10LQ9HCE6 1279 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 IMPACTQ9P2X3 320 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PNMA2Q9UL42 364 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
ATXN3-221ENST00000553498 VWA3AA6NCI4 1184 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 J3QL48 77 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 OR52Z1P0C646 297 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 PPP1R2P41236 205 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 GSDMDP57764 484 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 ZNF280AP59817 542 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 TCP10Q12799 353 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 MORC3Q14149 939 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 PDIA5Q14554 519 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms