RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 BTAF1O14981 1849 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 NSD2O96028 1365 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 INSRP06213 1382 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 DIAPH1O60610 1272 aaKnown RBP6.2□□□□□ -1.42
ATXN3-220ENST00000553491 DNAJA2O60884 412 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
ATXN3-220ENST00000553491 HMOX1P09601 288 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 ZNF165P49910 485 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 CLCN7P51798 805 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 RBL2Q08999 1139 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 DIEXFQ68CQ4 756 aaKnown RBP6.2□□□□□ -1.42
ATXN3-220ENST00000553491 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 CCDC81Q6ZN84 652 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 REXO1Q8N1G1 1221 aaKnown RBP6.2□□□□□ -1.42
ATXN3-220ENST00000553491 HSPA12BQ96MM6 686 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 TPX2Q9ULW0 747 aaKnown RBP6.2□□□□□ -1.42
ATXN3-220ENST00000553491 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
ATXN3-220ENST00000553491 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 GNAT3A8MTJ3 354 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 KCNQ2O43526 872 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 GRIN3BO60391 1043 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-220ENST00000553491 PLCG1P19174 1290 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 ETFBP38117 255 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 EZH2Q15910 746 aaKnown RBP6.19□□□□□ -1.42
ATXN3-220ENST00000553491 PLEKHO1Q53GL0 409 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-220ENST00000553491 GK5Q6ZS86 529 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 PTF1AQ7RTS3 328 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 MFSD4AQ8N468 514 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 ASB11Q8WXH4 323 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 SHDQ96IW2 340 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 Q96M66 194 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 ABCC6O95255 1503 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 DOT1LQ8TEK3 1739 aa6.19□□□□□ -1.42
ATXN3-220ENST00000553491 TNS1Q9HBL0 1735 aaKnown RBP6.19□□□□□ -1.42
ATXN3-220ENST00000553491 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
ATXN3-220ENST00000553491 HTR3BO95264 441 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 PAPLNO95428 1278 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 TNK2Q07912 1038 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 ZNF746Q6NUN9 644 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-220ENST00000553491 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 CYB5D2Q8WUJ1 264 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
ATXN3-220ENST00000553491 NUDCQ9Y266 331 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
ATXN3-220ENST00000553491 OVOS2A0A0G2JMS6 1433 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 ATE1O95260 518 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 CBX7O95931 251 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-220ENST00000553491 KIR3DL1P43629 444 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-220ENST00000553491 C1orf141Q5JVX7 400 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 ANGEL2Q5VTE6 544 aaKnown RBP6.17□□□□□ -1.42
ATXN3-220ENST00000553491 FBXW10Q5XX13 1052 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 ZNF530Q6P9A1 599 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-220ENST00000553491 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 LRRN4CLQ8ND94 238 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 ZNRF3Q9ULT6 936 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 KIF24Q5T7B8 1368 aa6.17□□□□□ -1.42
ATXN3-220ENST00000553491 SCN11AQ9UI33 1791 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 PAX4O43316 350 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 JUNBP17275 347 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-220ENST00000553491 CYP7A1P22680 504 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 IL13P35225 146 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 GIPRP48546 466 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 EIF6P56537 245 aaKnown RBP6.16□□□□□ -1.42
ATXN3-220ENST00000553491 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 IFNL2Q8IZJ0 200 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 FAM169BQ8N8A8 192 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 PI4K2BQ8TCG2 481 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 LNPKQ9C0E8 428 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 ANTXR1Q9H6X2 564 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 PCDH11XQ9BZA7 1347 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 PCDH11YQ9BZA8 1340 aa6.16□□□□□ -1.42
ATXN3-220ENST00000553491 MEGF6O75095 1541 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 NHSQ6T4R5 1651 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 FAM155AB1AL88 458 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 H3BS24 57 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 ETV3P41162 512 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms