RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 IQSEC1Q6DN90 963 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 RMDN3Q96TC7 470 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 AP5M1Q9H0R1 490 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 PRDM5Q9NQX1 630 aaPredicted RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 SEC63Q9UGP8 760 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 hCG_1642624A0A1W2PR95 340 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 B4DLN1 442 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 CTAGE5O15320 804 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 GNAQP50148 359 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 HSD17B4P51659 736 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 MRPL12P52815 198 aaKnown RBP11.81□□□□□ -0.52
LINC00517-201ENST00000553396 SNX17Q15036 470 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
LINC00517-201ENST00000553396 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 CCSAPQ6IQ19 270 aaPredicted RBP11.81□□□□□ -0.52
LINC00517-201ENST00000553396 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
LINC00517-201ENST00000553396 KCNB2Q92953 911 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 TSEN34Q9BSV6 310 aaKnown RBP11.81□□□□□ -0.52
LINC00517-201ENST00000553396 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
LINC00517-201ENST00000553396 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 KLF18A0A0U1RQI7 1052 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 ZBTB43O43298 467 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 PQBP1O60828 265 aaKnown RBP11.8□□□□□ -0.52
LINC00517-201ENST00000553396 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
LINC00517-201ENST00000553396 MAGEA10P43363 369 aaPredicted RBP11.8□□□□□ -0.52
LINC00517-201ENST00000553396 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
LINC00517-201ENST00000553396 TLE2Q04725 743 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 TRAF1Q13077 416 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 DUSP28Q4G0W2 176 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 SEPT14Q6ZU15 432 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 Q6ZUG5 572 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 SCFD2Q8WU76 684 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 COPS5Q92905 334 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
LINC00517-201ENST00000553396 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
LINC00517-201ENST00000553396 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
LINC00517-201ENST00000553396 ARIH2O95376 493 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 NR3C2P08235 984 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
LINC00517-201ENST00000553396 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
LINC00517-201ENST00000553396 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
LINC00517-201ENST00000553396 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 GHRHRQ02643 423 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 APOBRQ0VD83 1088 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 STXBP2Q15833 593 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 RTN1Q16799 776 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 OR6J1Q8NGC5 347 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 IL31RAQ8NI17 732 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 BRF1Q92994 677 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 MAF1Q9H063 256 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 PRO3102Q9H379 93 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 Q9Y3F1 56 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
LINC00517-201ENST00000553396 ZEB2O60315 1214 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 RPS6KB1P23443 525 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 PGM5Q15124 567 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 HEATR3Q7Z4Q2 680 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 SH3RF1Q7Z6J0 888 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
LINC00517-201ENST00000553396 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
LINC00517-201ENST00000553396 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 GDF15Q99988 308 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
LINC00517-201ENST00000553396 ELP1O95163 1332 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
LINC00517-201ENST00000553396 LAMA3Q16787 3333 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms