RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 NUP88Q99567 741 aaPredicted RBP8.31□□□□□ -1.08
RDH11-203ENST00000553384 ZKSCAN3Q9BRR0 538 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 CLSTN2Q9H4D0 955 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 IL17RBQ9NRM6 502 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 RCOR1Q9UKL0 485 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
RDH11-203ENST00000553384 MYH4Q9Y623 1939 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 KLF18A0A0U1RQI7 1052 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 OFD1O75665 1012 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 CLTBP09497 229 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 CEBPZQ03701 1054 aaKnown RBP8.3□□□□□ -1.08
RDH11-203ENST00000553384 GRIN2CQ14957 1233 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
RDH11-203ENST00000553384 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 GMCL1P1Q8NEA9 526 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 MROH8Q9H579 483 aa8.3□□□□□ -1.08
RDH11-203ENST00000553384 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
RDH11-203ENST00000553384 ERICH2A1L162 156 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 NR1I2O75469 434 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 BMP3P12645 472 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 RAG1P15918 1043 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 DNAJB2P25686 324 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 PLA2G5P39877 138 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 STAT2P52630 851 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TYRO3Q06418 890 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 SART3Q15020 963 aaKnown RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 CCDC96Q2M329 555 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 RNF180Q86T96 592 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 CKAP2LQ8IYA6 745 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 PRPF38AQ8NAV1 312 aaKnown RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 KIFC2Q96AC6 838 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 SLF1Q9BQI6 1058 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 MOV10L1Q9BXT6 1211 aaKnown RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 SPATC1LQ9H0A9 340 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ZNF576Q9H609 170 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TCP11L1Q9NUJ3 509 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 FBXO28Q9NVF7 368 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ZSWIM5Q9P217 1185 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ZNF236Q9UL36 1845 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 GOLGA8BA8MQT2 603 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TMEM232C9JQI7 657 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 CPLX1O14810 134 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 GUCY1B3Q02153 619 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 FPGSQ05932 587 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 SASS6Q6UVJ0 657 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 ANKRD33Q7Z3H0 272 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 DGKHQ86XP1 1220 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 USP38Q8NB14 1042 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 CHURC1Q8WUH1 139 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ASB2Q96Q27 587 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 USP28Q96RU2 1077 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ZSCAN10Q96SZ4 725 aaPredicted RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 TMEM47Q9BQJ4 181 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 KAT14Q9H8E8 782 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 FEM1BQ9UK73 627 aa8.29□□□□□ -1.08
RDH11-203ENST00000553384 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
RDH11-203ENST00000553384 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 VWA5AO00534 786 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 COBLO75128 1261 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 ZBED4O75132 1171 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 RARBP10826 455 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 ERCC3P19447 782 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 ITGB8P26012 769 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 TERF1P54274 439 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 EPHB4P54760 987 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 PLCB2Q00722 1185 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 IFIT1BQ5T764 474 aaKnown RBP8.28□□□□□ -1.08
RDH11-203ENST00000553384 KCTD1Q719H9 257 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 CPXCR1Q8N123 301 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 FERMT2Q96AC1 680 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 MAML3Q96JK9 1138 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 C8orf76Q96K31 380 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 XPNPEP3Q9NQH7 507 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 ORC3Q9UBD5 711 aaPredicted RBP8.28□□□□□ -1.08
RDH11-203ENST00000553384 DIS3Q9Y2L1 958 aaKnown RBP8.28□□□□□ -1.08
RDH11-203ENST00000553384 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
RDH11-203ENST00000553384 TNKSO95271 1327 aa8.28□□□□□ -1.08
RDH11-203ENST00000553384 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
RDH11-203ENST00000553384 SH2B2O14492 632 aaPredicted RBP8.27□□□□□ -1.09
RDH11-203ENST00000553384 AP5Z1O43299 807 aa8.27□□□□□ -1.09
RDH11-203ENST00000553384 SLC25A27O95847 323 aa8.27□□□□□ -1.09
RDH11-203ENST00000553384 FCER1AP12319 257 aa8.27□□□□□ -1.09
RDH11-203ENST00000553384 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
RDH11-203ENST00000553384 ANO6Q4KMQ2 910 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms