RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
CNOT2-243ENST00000553078 PNMA2Q9UL42 364 aa11.42□□□□□ -0.58
CNOT2-243ENST00000553078 PCDHA12Q9UN75 941 aa11.42□□□□□ -0.58
CNOT2-243ENST00000553078 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
CNOT2-243ENST00000553078 CTDP1Q9Y5B0 961 aaPredicted RBP11.42□□□□□ -0.58
CNOT2-243ENST00000553078 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
CNOT2-243ENST00000553078 PHLPP2Q6ZVD8 1323 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 YDJCA8MPS7 323 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 RIOK3O14730 519 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 ADAMTS3O15072 1205 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 SLC37A4O43826 429 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 IPO7O95373 1038 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 CCDC175P0C221 793 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 IDEP14735 1019 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 DPEP1P16444 411 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 RPS12P25398 132 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 PRCPP42785 496 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 MTIF2P46199 727 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 TBX2Q13207 712 aaPredicted RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 NR1I3Q14994 352 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 KRT31Q15323 416 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 SYCP1Q15431 976 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 USH1GQ495M9 461 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 NAALADL2Q58DX5 795 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 POTEAQ6S8J7 498 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 SH3BP5LQ7L8J4 393 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 CSGALNACT2Q8N6G5 542 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 PCMTD1Q96MG8 357 aaPredicted RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 NUP58Q9BVL2 599 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 TAB2Q9NYJ8 693 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 ZBTB21Q9ULJ3 1066 aa11.41□□□□□ -0.58
CNOT2-243ENST00000553078 MRPL11Q9Y3B7 192 aaKnown RBP11.41□□□□□ -0.58
CNOT2-243ENST00000553078 ABCB11O95342 1321 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 BAZ2BQ9UIF8 2168 aaKnown RBP11.4□□□□□ -0.58
CNOT2-243ENST00000553078 LGALS16A8MUM7 142 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 TBC1D12O60347 775 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 MFAP3LO75121 409 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
CNOT2-243ENST00000553078 ASNSP08243 561 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 DNM2P50570 870 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 ARHGAP4P98171 946 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 UBXN1Q04323 297 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 LRRC63Q05C16 580 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 TMEM119Q4V9L6 283 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 KCTD17Q8N5Z5 321 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 ZNF397Q8NF99 534 aaPredicted RBP11.4□□□□□ -0.58
CNOT2-243ENST00000553078 PRMT6Q96LA8 375 aaPredicted RBP11.4□□□□□ -0.58
CNOT2-243ENST00000553078 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
CNOT2-243ENST00000553078 TMX2Q9Y320 296 aa11.4□□□□□ -0.58
CNOT2-243ENST00000553078 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
CNOT2-243ENST00000553078 SIPA1L1O43166 1804 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 SCN9AQ15858 1988 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 A0A1W2PQC6 194 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 POTEMA6NI47 508 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 GCOM1H8Y6P7 765 aaPredicted RBP11.39□□□□□ -0.59
CNOT2-243ENST00000553078 KLRC4O43908 158 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 PPP1R11O60927 126 aaPredicted RBP11.39□□□□□ -0.59
CNOT2-243ENST00000553078 POLR2MP0CAP2 368 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 SREBF1P36956 1147 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 SETQ01105 290 aaPredicted RBP11.39□□□□□ -0.59
CNOT2-243ENST00000553078 GRB10Q13322 594 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 MCM6Q14566 821 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 HSP90AA2PQ14568 343 aaPredicted RBP11.39□□□□□ -0.59
CNOT2-243ENST00000553078 CYP26C1Q6V0L0 522 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 TMTC1Q8IUR5 882 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 ERO1AQ96HE7 468 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 MTRQ99707 1265 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 VPS16Q9H269 839 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 INTS13Q9NVM9 706 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 TCEAL9Q9UHQ7 104 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 PPP2R2CQ9Y2T4 447 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 PCDHAC2Q9Y5I4 1007 aa11.39□□□□□ -0.59
CNOT2-243ENST00000553078 CYP3A7-CYP3A51PA0A087WV96 503 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L15C9J2P7 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L13C9JLJ4 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L11C9JVI0 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L18D6R9N7 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L22D6RA61 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L17D6RBQ6 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L19D6RCP7 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 USP17L20D6RJB6 530 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 KIF5CO60282 957 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 PLA2G6O60733 806 aa11.38□□□□□ -0.59
CNOT2-243ENST00000553078 SLU7O95391 586 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms