RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TM6SF1Q9BZW5 370 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-218ENST00000552839 SCN5AQ14524 2016 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 SH2B2O14492 632 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 CPA1P15085 419 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 PTGS1P23219 599 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 NEK4P51957 841 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 Q6ZUG5 572 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 MICALL1Q8N3F8 863 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 VWCEQ96DN2 955 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 NOC4LQ9BVI4 516 aaKnown RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 WNT8AQ9H1J5 351 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 GNEQ9Y223 722 aaKnown RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 SLC12A7Q9Y666 1083 aa13.22□□□□□ -0.29
TMEM116-218ENST00000552839 PRRC2BQ5JSZ5 2229 aaKnown RBP13.22□□□□□ -0.29
TMEM116-218ENST00000552839 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 B4GALT4O60513 344 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 CABYRO75952 493 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 KCNQ1P51787 676 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 NOL8Q76FK4 1167 aaKnown RBP13.21□□□□□ -0.29
TMEM116-218ENST00000552839 TLK2Q86UE8 772 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 BRF1Q92994 677 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 FEM1BQ9UK73 627 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 SLC4A7Q9Y6M7 1214 aa13.21□□□□□ -0.29
TMEM116-218ENST00000552839 LCTP09848 1927 aa13.21□□□□□ -0.3
TMEM116-218ENST00000552839 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
TMEM116-218ENST00000552839 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
TMEM116-218ENST00000552839 SLC1A4P43007 532 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 OAZ1P54368 228 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 ANTXR2P58335 489 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
TMEM116-218ENST00000552839 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
TMEM116-218ENST00000552839 MKL1Q969V6 931 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 SCLYQ96I15 445 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 AGBL1Q96MI9 1066 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
TMEM116-218ENST00000552839 CHD9Q3L8U1 2897 aa13.2□□□□□ -0.3
TMEM116-218ENST00000552839 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 RFXAPO00287 272 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-218ENST00000552839 DDAH1O94760 285 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 CALM1P0DP23 149 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 CALM2P0DP24 149 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 CALM3P0DP25 149 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
TMEM116-218ENST00000552839 SMPD1P17405 629 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 KIF5BP33176 963 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 PSMC6P62333 389 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
TMEM116-218ENST00000552839 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
TMEM116-218ENST00000552839 AAK1Q2M2I8 961 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 LY9Q9HBG7 655 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 A1CFQ9NQ94 594 aaKnown RBP13.19□□□□□ -0.3
TMEM116-218ENST00000552839 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
TMEM116-218ENST00000552839 ZNF536O15090 1300 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 REV3LO60673 3130 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 ASB14A6NK59 587 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 ZBTB43O43298 467 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 ZEB2O60315 1214 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
TMEM116-218ENST00000552839 BMP3P12645 472 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 LIFRP42702 1097 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 EXOSC10Q01780 885 aaKnown RBP13.18□□□□□ -0.3
TMEM116-218ENST00000552839 TTLL4Q14679 1199 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms