RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CCNA1P78396 465 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 FAM160A1Q05DH4 1040 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 CYFIP1Q7L576 1253 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
CHPT1-208ENST00000552215 LPAR1Q92633 364 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 MYH2Q9UKX2 1941 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 TMEM150BA6NC51 233 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTECB2RU33 542 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 E9PMD0 336 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 CETPP11597 493 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 MTMR1Q13613 665 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 SLC39A2Q9NP94 309 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 TMEM132BQ14DG7 1078 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 XKR9Q5GH70 373 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 FBXO16Q8IX29 292 aaPredicted RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 TOB1P50616 345 aaPredicted RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 TYRO3Q06418 890 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 ZNF830Q96NB3 372 aaPredicted RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 AGXT2Q9BYV1 514 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 KIAA1683Q9H0B3 1180 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 GRPEL1Q9HAV7 217 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 ARHGEF35A5YM69 484 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 BTBD19C9JJ37 291 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 NR3C2P08235 984 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 ARP10275 920 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 DEFB115Q30KQ5 88 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 MTERF2Q49AM1 385 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 PORCNQ9H237 461 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 NPHP3-ACAD11A0A0J9YXS1 232 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 CUTAO60888 179 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 FAM13AO94988 1023 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 PLCG1P19174 1290 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 KIF22Q14807 665 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 FAM43AQ8N2R8 423 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 IL31RAQ8NI17 732 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 NAT10Q9H0A0 1025 aaKnown RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 FAM49AQ9H0Q0 323 aaPredicted RBP9.17□□□□□ -0.94
CHPT1-208ENST00000552215 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
CHPT1-208ENST00000552215 TAF1LQ8IZX4 1826 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 LTBP3Q9NS15 1303 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 ZBTB39O15060 712 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 FAM102BQ5T8I3 360 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 ADALQ6DHV7 355 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 SV2BQ7L1I2 683 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 GPBP1Q86WP2 473 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 SPATC1LQ9H0A9 340 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 BHMT2Q9H2M3 363 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 AZI2Q9H6S1 392 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 CYP2C19P33261 490 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 GNPTABQ3T906 1256 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 SWSAP1Q6NVH7 229 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 RGMBQ6NW40 437 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 GAS2L3Q86XJ1 694 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 MYCT1Q8N699 235 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 PCDHA5Q9Y5H7 936 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 WNK3Q9BYP7 1800 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 YEATS4O95619 227 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 GTF2A2P52657 109 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 NSUN6Q8TEA1 469 aaKnown RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 MOV10L1Q9BXT6 1211 aaKnown RBP9.16□□□□□ -0.94
CHPT1-208ENST00000552215 R3HDMLQ9H3Y0 253 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 RIC8AQ9NPQ8 531 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 DNM3Q9UQ16 869 aa9.16□□□□□ -0.94
CHPT1-208ENST00000552215 TMEM62Q0P6H9 643 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 SHC4Q6S5L8 630 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 ALDH8A1Q9H2A2 487 aaPredicted RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 RIOX1Q9H6W3 641 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 RCOR1Q9UKL0 485 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 LY75O60449 1722 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 COL5A3P25940 1745 aaPredicted RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 DDX60Q8IY21 1712 aaKnown RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 SPDYE16A6NNV3 312 aaPredicted RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 PDIA4P13667 645 aaKnown RBP9.15□□□□□ -0.94
CHPT1-208ENST00000552215 STIM1Q13586 685 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 COPS5Q92905 334 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms