RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 TXNP10599 105 aaKnown RBP18.99■□□□□ 0.63
VPS29-207ENST00000549970 ANTXR2P58335 489 aa18.99■□□□□ 0.63
VPS29-207ENST00000549970 TTLL4Q14679 1199 aa18.99■□□□□ 0.63
VPS29-207ENST00000549970 MB21D2Q8IYB1 491 aaPredicted RBP18.99■□□□□ 0.63
VPS29-207ENST00000549970 MTMR8Q96EF0 704 aa18.99■□□□□ 0.63
VPS29-207ENST00000549970 POLR3EQ9NVU0 708 aa18.99■□□□□ 0.63
VPS29-207ENST00000549970 B4GALT4O60513 344 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 EIF2AK2P19525 551 aaKnown RBP18.98■□□□□ 0.63
VPS29-207ENST00000549970 PURAQ00577 322 aaKnown RBP18.98■□□□□ 0.63
VPS29-207ENST00000549970 TROAPQ12815 778 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS29-207ENST00000549970 SLC35G1Q2M3R5 365 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 BRDTQ58F21 947 aaPredicted RBP18.98■□□□□ 0.63
VPS29-207ENST00000549970 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 ARHGEF16Q5VV41 709 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 SEPT14Q6ZU15 432 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 CATIPQ7Z7H3 387 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 PIGSQ96S52 555 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
VPS29-207ENST00000549970 TRPV6Q9H1D0 765 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 GPHNQ9NQX3 736 aaPredicted RBP18.98■□□□□ 0.63
VPS29-207ENST00000549970 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
VPS29-207ENST00000549970 OPLAHO14841 1288 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 CSF2RAP15509 400 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 CYP2C18P33260 490 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 STXBP2Q15833 593 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 FAM109BQ6ICB4 259 aaPredicted RBP18.97■□□□□ 0.63
VPS29-207ENST00000549970 CENPQQ7L2Z9 268 aaPredicted RBP18.97■□□□□ 0.63
VPS29-207ENST00000549970 TMEM199Q8N511 208 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 IGDCC4Q8TDY8 1250 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 IWS1Q96ST2 819 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.97■□□□□ 0.63
VPS29-207ENST00000549970 MTG1Q9BT17 334 aaPredicted RBP18.97■□□□□ 0.63
VPS29-207ENST00000549970 SEZ6LQ9BYH1 1024 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 HIPK3Q9H422 1215 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 RIOX1Q9H6W3 641 aa18.97■□□□□ 0.63
VPS29-207ENST00000549970 CDH23Q9H251 3354 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 CYTH3O43739 400 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 HSD17B4P51659 736 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
VPS29-207ENST00000549970 CASC1Q6TDU7 716 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 ALDH8A1Q9H2A2 487 aaPredicted RBP18.96■□□□□ 0.63
VPS29-207ENST00000549970 PXMP2Q9NR77 195 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 STXBP5LQ9Y2K9 1186 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 UMODL1Q5DID0 1318 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 KIAA1217Q5T5P2 1943 aa18.96■□□□□ 0.63
VPS29-207ENST00000549970 PRC1O43663 620 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 ACRP10323 421 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
VPS29-207ENST00000549970 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 CCDC62Q6P9F0 684 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 PPP1R13LQ8WUF5 828 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 GUCD1Q96NT3 240 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 MYL10Q9BUA6 226 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 LY9Q9HBG7 655 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 ANO2Q9NQ90 1003 aa18.95■□□□□ 0.62
VPS29-207ENST00000549970 TRMT13Q9NUP7 481 aaKnown RBP18.95■□□□□ 0.62
VPS29-207ENST00000549970 SCN10AQ9Y5Y9 1956 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 A6NJR5 290 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 SLC27A2O14975 620 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 NR3C2P08235 984 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 CCL23P55773 120 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 GHRHRQ02643 423 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 BMP2KLQ5H9B9 411 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 FAM47CQ5HY64 1035 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 TMEM240Q5SV17 173 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 CREB3L3Q68CJ9 461 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 ZNF654Q8IZM8 581 aa18.94■□□□□ 0.62
VPS29-207ENST00000549970 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 KPNA6O60684 536 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 GH1P01241 217 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 MYCLP12524 364 aaPredicted RBP18.93■□□□□ 0.62
VPS29-207ENST00000549970 MCM5P33992 734 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 CHMP4BP1P59074 171 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 TRAF1Q13077 416 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 COL9A3Q14050 684 aaPredicted RBP18.93■□□□□ 0.62
VPS29-207ENST00000549970 NBPF20Q3BBV1 942 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 NFXL1Q6ZNB6 911 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 CTCFLQ8NI51 663 aaPredicted RBP18.93■□□□□ 0.62
VPS29-207ENST00000549970 AFG1LQ8WV93 481 aa18.93■□□□□ 0.62
VPS29-207ENST00000549970 NOC4LQ9BVI4 516 aaKnown RBP18.93■□□□□ 0.62
VPS29-207ENST00000549970 MAP3K20Q9NYL2 800 aaKnown RBP18.93■□□□□ 0.62
VPS29-207ENST00000549970 GCOM1H8Y6P7 765 aaPredicted RBP18.92■□□□□ 0.62
VPS29-207ENST00000549970 SH2B2O14492 632 aaPredicted RBP18.92■□□□□ 0.62
VPS29-207ENST00000549970 EIF3JO75822 258 aaKnown RBP18.92■□□□□ 0.62
VPS29-207ENST00000549970 DDAH1O94760 285 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 MMP3P08254 477 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 POLR2MP0CAP2 368 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 CYP2C9P11712 490 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 ARHGAP1Q07960 439 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
VPS29-207ENST00000549970 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 FCHSD1Q86WN1 690 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
VPS29-207ENST00000549970 WNT8AQ9H1J5 351 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms