RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 VCPKMTQ9H867 229 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 BARX2Q9UMQ3 279 aaPredicted RBP12.83□□□□□ -0.36
TROAP-210ENST00000549534 TMX2Q9Y320 296 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 TAF4O00268 1085 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 SLC30A4O14863 429 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 LGR5O75473 907 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 NPR3P17342 541 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
TROAP-210ENST00000549534 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
TROAP-210ENST00000549534 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
TROAP-210ENST00000549534 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
TROAP-210ENST00000549534 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 USP17L21D6R901 530 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 IGSF3O75054 1194 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 GLP2RO95838 553 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 MYL3P08590 195 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 ADORA1P30542 326 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 SHMT1P34896 483 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 FAM9BQ8IZU0 186 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 SPICE1Q8N0Z3 855 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 NETO1Q8TDF5 533 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
TROAP-210ENST00000549534 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
TROAP-210ENST00000549534 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 SP9P0CG40 484 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 CKBP12277 381 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
TROAP-210ENST00000549534 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 DUSP28Q4G0W2 176 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
TROAP-210ENST00000549534 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 SESTD1Q86VW0 696 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 ANKFY1Q9P2R3 1169 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 RIPK3Q9Y572 518 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 EMSYQ7Z589 1322 aa12.8□□□□□ -0.36
TROAP-210ENST00000549534 TMEM8BA6NDV4 472 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 SPTLC1O15269 473 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
TROAP-210ENST00000549534 RING1Q06587 406 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 CAMK1Q14012 370 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 CERS3Q8IU89 383 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 CHST13Q8NET6 341 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 IL17RAQ96F46 866 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 FBXO28Q9NVF7 368 aa12.79□□□□□ -0.36
TROAP-210ENST00000549534 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
TROAP-210ENST00000549534 LINC00271P0C7V0 271 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 PTGS1P23219 599 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
TROAP-210ENST00000549534 NRIP1P48552 1158 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 ADGRD2Q7Z7M1 963 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
TROAP-210ENST00000549534 P2RX5Q93086 422 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 PDGFCQ9NRA1 345 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 SCN10AQ9Y5Y9 1956 aa12.78□□□□□ -0.36
TROAP-210ENST00000549534 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 SLC4A10Q6U841 1118 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 PRR23BQ6ZRT6 265 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 DBF4BQ8NFT6 615 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
TROAP-210ENST00000549534 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
TROAP-210ENST00000549534 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
TROAP-210ENST00000549534 CDCA3Q99618 268 aaPredicted RBP12.77□□□□□ -0.37
TROAP-210ENST00000549534 S1PR5Q9H228 398 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 SMOC2Q9H3U7 446 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 PLAGL2Q9UPG8 496 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 RAD50Q92878 1312 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 MICAL3Q7RTP6 2002 aa12.77□□□□□ -0.37
TROAP-210ENST00000549534 TGM1P22735 817 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 ZDHHC14Q8IZN3 488 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 NECTIN4Q96NY8 510 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
TROAP-210ENST00000549534 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
TROAP-210ENST00000549534 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
TROAP-210ENST00000549534 MCM3APO60318 1980 aa12.75□□□□□ -0.37
TROAP-210ENST00000549534 UPP2O95045 317 aa12.75□□□□□ -0.37
TROAP-210ENST00000549534 GABPAQ06546 454 aa12.75□□□□□ -0.37
TROAP-210ENST00000549534 PLEKHG4Q58EX7 1191 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms