RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 CETPP11597 493 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 TXLNAP40222 546 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 TMEM266Q2M3C6 531 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 CST9Q5W186 159 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 GPAT2Q6NUI2 795 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 SYMPKQ92797 1274 aaKnown RBP13.68□□□□□ -0.22
PTPRR-209ENST00000549308 EPSTI1Q96J88 318 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
PTPRR-209ENST00000549308 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
PTPRR-209ENST00000549308 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CYP3A7-CYP3A51PA0A087WV96 503 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CYP3A4P08684 503 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CYP3A7P24462 503 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 TXKP42681 527 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 HUNKP57058 714 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 HERVK_113P62684 666 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 UBXN2AP68543 259 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 GHRHRQ02643 423 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 USP49Q70CQ1 688 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 MTMR9Q96QG7 549 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
PTPRR-209ENST00000549308 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
PTPRR-209ENST00000549308 TECP42680 631 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 CCL15Q16663 113 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 PRR16Q569H4 304 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 SPRYD7Q5W111 196 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 PDILTQ8N807 584 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
PTPRR-209ENST00000549308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
PTPRR-209ENST00000549308 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
PTPRR-209ENST00000549308 CIITAP33076 1130 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 UBA7P41226 1012 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 RPS6P62753 249 aaKnown RBP13.65□□□□□ -0.22
PTPRR-209ENST00000549308 BAATQ14032 418 aaPredicted RBP13.65□□□□□ -0.22
PTPRR-209ENST00000549308 Q4G0T1 1027 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 KRBA2Q6ZNG9 492 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 RASSF8Q8NHQ8 419 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 AK8Q96MA6 479 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 TSPY26PQ9H489 355 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 SERTAD1Q9UHV2 236 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.22
PTPRR-209ENST00000549308 PEX10O60683 326 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 DHX58Q96C10 678 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 TAAR1Q96RJ0 339 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 PDHXO00330 501 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 CNMDO75829 334 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 CDC25AP30304 524 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 ZNF157P51786 506 aaPredicted RBP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 CABP7Q86V35 215 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 NCAPG2Q86XI2 1143 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 BRI3BPQ8WY22 251 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 HAS1Q92839 578 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 MAF1Q9H063 256 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 LRWD1Q9UFC0 647 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 CCDC39Q9UFE4 941 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
PTPRR-209ENST00000549308 HOOK1Q9UJC3 728 aaKnown RBP13.64□□□□□ -0.23
PTPRR-209ENST00000549308 A0A087X0B3 334 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 BTBD19C9JJ37 291 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 TBX3O15119 743 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms