RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 FTOQ9C0B1 505 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDX2-202ENST00000548877 NAPBQ9H115 298 aa16.01■□□□□ 0.15
CDX2-202ENST00000548877 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
CDX2-202ENST00000548877 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
CDX2-202ENST00000548877 ISY1Q9ULR0 285 aaKnown RBP16.01■□□□□ 0.15
CDX2-202ENST00000548877 STX8Q9UNK0 236 aa16.01■□□□□ 0.15
CDX2-202ENST00000548877 NFIBO00712 420 aa16■□□□□ 0.15
CDX2-202ENST00000548877 WDR5P61964 334 aaKnown RBP16■□□□□ 0.15
CDX2-202ENST00000548877 PPP2R5BQ15173 497 aa16■□□□□ 0.15
CDX2-202ENST00000548877 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
CDX2-202ENST00000548877 SPRED2Q7Z698 418 aa16■□□□□ 0.15
CDX2-202ENST00000548877 DNERQ8NFT8 737 aa16■□□□□ 0.15
CDX2-202ENST00000548877 GPATCH3Q96I76 525 aa16■□□□□ 0.15
CDX2-202ENST00000548877 SIP14410 1827 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 FOXP2O15409 715 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 CXCL10P02778 98 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 FGRP09769 529 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 ERVK-21P61565 698 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 RASGRP2Q7LDG7 609 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 CCDC155Q8N6L0 562 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
CDX2-202ENST00000548877 MAF1Q9H063 256 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 ANAPC4Q9UJX5 808 aa15.99■□□□□ 0.15
CDX2-202ENST00000548877 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 TSPY2A6NKD2 308 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 PRR33A8MZF0 331 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 NMT2O60551 498 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 KCNJ6P48051 423 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 LEXMQ3ZCV2 418 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 TTBK2Q6IQ55 1244 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 FAM178BQ8IXR5 827 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
CDX2-202ENST00000548877 RAD9AQ99638 391 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 SUGCTQ9HAC7 445 aa15.98■□□□□ 0.15
CDX2-202ENST00000548877 WDR19Q8NEZ3 1342 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 ABHD14A-ACY1A0A1B0GW23 586 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 ORC4O43929 436 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 GJB5O95377 273 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 SELPP16109 830 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 PDE4DQ08499 809 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 PTGISQ16647 500 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 CNKSR3Q6P9H4 555 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 RGS22Q8NE09 1264 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 COPS5Q92905 334 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 CHMP4CQ96CF2 233 aa15.97■□□□□ 0.15
CDX2-202ENST00000548877 UBE2ZQ9H832 354 aaPredicted RBP15.97■□□□□ 0.15
CDX2-202ENST00000548877 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 PTPDC1A2A3K4 754 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 FAM86C2PA6NEL3 165 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 B4DLN1 442 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 EFCAB14O75071 495 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 TXNP10599 105 aaKnown RBP15.96■□□□□ 0.15
CDX2-202ENST00000548877 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
CDX2-202ENST00000548877 RPS6P62753 249 aaKnown RBP15.96■□□□□ 0.15
CDX2-202ENST00000548877 GJD3Q8N144 294 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 GDPD5Q8WTR4 605 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 DHX38Q92620 1227 aaKnown RBP15.96■□□□□ 0.15
CDX2-202ENST00000548877 TGS1Q96RS0 853 aaKnown RBP15.96■□□□□ 0.15
CDX2-202ENST00000548877 TCP11L1Q9NUJ3 509 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 NOD1Q9Y239 953 aa15.96■□□□□ 0.15
CDX2-202ENST00000548877 ARIH2O95376 493 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 TOP1P11387 765 aaKnown RBP15.95■□□□□ 0.14
CDX2-202ENST00000548877 CALML3P27482 149 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 SLC16A2P36021 539 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 DEFB103AP81534 67 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
CDX2-202ENST00000548877 LRRC8DQ7L1W4 858 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.95■□□□□ 0.14
CDX2-202ENST00000548877 PPP1R13LQ8WUF5 828 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 KAT2BQ92831 832 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 KIAA1217Q5T5P2 1943 aa15.95■□□□□ 0.14
CDX2-202ENST00000548877 LINC01553A4QN01 128 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 NBNO60934 754 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 CTDSPL2Q05D32 466 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 ALX1Q15699 326 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 PI4K2BQ8TCG2 481 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 TMEM47Q9BQJ4 181 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 ZBED2Q9BTP6 218 aa15.94■□□□□ 0.14
CDX2-202ENST00000548877 RANBP6O60518 1105 aaKnown RBP15.93■□□□□ 0.14
CDX2-202ENST00000548877 MMP3P08254 477 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 CKBP12277 381 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 ALADP13716 330 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 ARHGAP1Q07960 439 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
CDX2-202ENST00000548877 TCTN1Q2MV58 587 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 PUS10Q3MIT2 529 aaKnown RBP15.93■□□□□ 0.14
CDX2-202ENST00000548877 TRAF7Q6Q0C0 670 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 TMCO2Q7Z6W1 182 aaPredicted RBP15.93■□□□□ 0.14
CDX2-202ENST00000548877 AFG1LQ8WV93 481 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 KCNH6Q9H252 994 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms