RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RTN1Q16799 776 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 BRF1Q92994 677 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
DDX54-205ENST00000548786 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 UPF3AQ9H1J1 476 aaKnown RBP18.25■□□□□ 0.51
DDX54-205ENST00000548786 PRDM5Q9NQX1 630 aaPredicted RBP18.25■□□□□ 0.51
DDX54-205ENST00000548786 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
DDX54-205ENST00000548786 RANBP2P49792 3224 aaKnown RBP18.25■□□□□ 0.51
DDX54-205ENST00000548786 GCOM1H8Y6P7 765 aaPredicted RBP18.24■□□□□ 0.51
DDX54-205ENST00000548786 CTAGE5O15320 804 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 PQBP1O60828 265 aaKnown RBP18.24■□□□□ 0.51
DDX54-205ENST00000548786 POLR2MP0CAP2 368 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 MYCLP12524 364 aaPredicted RBP18.24■□□□□ 0.51
DDX54-205ENST00000548786 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
DDX54-205ENST00000548786 IQSEC1Q6DN90 963 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 CCSAPQ6IQ19 270 aaPredicted RBP18.24■□□□□ 0.51
DDX54-205ENST00000548786 COPS5Q92905 334 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 STARD7Q9NQZ5 370 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 PXMP2Q9NR77 195 aa18.24■□□□□ 0.51
DDX54-205ENST00000548786 LOC102724159A0A0B4J2E5 919 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 B4DLN1 442 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 CST5P28325 142 aaPredicted RBP18.23■□□□□ 0.51
DDX54-205ENST00000548786 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
DDX54-205ENST00000548786 TRAF1Q13077 416 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 PWP2Q15269 919 aaKnown RBP18.23■□□□□ 0.51
DDX54-205ENST00000548786 HEATR3Q7Z4Q2 680 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 PCSK9Q8NBP7 692 aaKnown RBP18.23■□□□□ 0.51
DDX54-205ENST00000548786 IL31RAQ8NI17 732 aa18.23■□□□□ 0.51
DDX54-205ENST00000548786 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
DDX54-205ENST00000548786 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
DDX54-205ENST00000548786 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 ARIH2O95376 493 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 TXNP10599 105 aaKnown RBP18.22■□□□□ 0.51
DDX54-205ENST00000548786 PSMA5P28066 241 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 MDM2Q00987 491 aaPredicted RBP18.22■□□□□ 0.51
DDX54-205ENST00000548786 TLE2Q04725 743 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 STXBP2Q15833 593 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 DUSP28Q4G0W2 176 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 CXCL17Q6UXB2 119 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 OR6J1Q8NGC5 347 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
DDX54-205ENST00000548786 RBM28Q9NW13 759 aaKnown RBP18.22■□□□□ 0.51
DDX54-205ENST00000548786 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
DDX54-205ENST00000548786 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 TRIOBPQ9H2D6 2365 aa18.22■□□□□ 0.51
DDX54-205ENST00000548786 SORBS3O60504 671 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 NR3C2P08235 984 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 SMARCA1P28370 1054 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 CDC27P30260 824 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
DDX54-205ENST00000548786 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDX54-205ENST00000548786 SNX17Q15036 470 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
DDX54-205ENST00000548786 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 IWS1Q96ST2 819 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 LARP6Q9BRS8 491 aaKnown RBP18.21■□□□□ 0.51
DDX54-205ENST00000548786 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
DDX54-205ENST00000548786 RBM47A0AV96 593 aaKnown RBP18.2■□□□□ 0.5
DDX54-205ENST00000548786 MYL3P08590 195 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 LY6KQ17RY6 165 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 SH3RF1Q7Z6J0 888 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 PDCD2LQ9BRP1 358 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 MAF1Q9H063 256 aa18.2■□□□□ 0.5
DDX54-205ENST00000548786 ADD1P35611 737 aaKnown RBP18.19■□□□□ 0.5
DDX54-205ENST00000548786 PSMC6P62333 389 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 GHRHRQ02643 423 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 PGM5Q15124 567 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 UBE2SQ16763 222 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 RUFY3Q7L099 469 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 CUL5Q93034 780 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 PDLIM7Q9NR12 457 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
DDX54-205ENST00000548786 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
DDX54-205ENST00000548786 V9GY48 417 aaPredicted RBP18.19■□□□□ 0.5
DDX54-205ENST00000548786 ZEB2O60315 1214 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 CCND2P30279 289 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 CHMP4BP1P59074 171 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 FUT2Q10981 343 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 MAP3K20Q9NYL2 800 aaKnown RBP18.18■□□□□ 0.5
DDX54-205ENST00000548786 Q9Y3F1 56 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 MRVI1Q9Y6F6 885 aa18.18■□□□□ 0.5
DDX54-205ENST00000548786 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 TRIM43BA6NCK2 446 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 MEIS2O14770 477 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 EPB41L2O43491 1005 aaKnown RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 CLTBP09497 229 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms