RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 HSD17B4P51659 736 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 MRPL12P52815 198 aaKnown RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 BEX3Q00994 111 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 TLE2Q04725 743 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 PDE4DQ08499 809 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 TRAF1Q13077 416 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 KRT32Q14532 448 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 DUSP28Q4G0W2 176 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 NFXL1Q6ZNB6 911 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 TLK2Q86UE8 772 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 CTCFLQ8NI51 663 aaPredicted RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 NSUN6Q8TEA1 469 aaKnown RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 GLT1D1Q96MS3 346 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 MPHOSPH6Q99547 160 aaKnown RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 TRIOBPQ9H2D6 2365 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 STARD7Q9NQZ5 370 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
PRIM1-203ENST00000548173 PCDH10Q9P2E7 1040 aa9.18□□□□□ -0.94
PRIM1-203ENST00000548173 REC8O95072 547 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 SLC34A2O95436 690 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 CALM1P0DP23 149 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 CALM2P0DP24 149 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 CALM3P0DP25 149 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 RXRAP19793 462 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 HSPA4P34932 840 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 GNAQP50148 359 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 CDK7P50613 346 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 FXR1P51114 621 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRIM1-203ENST00000548173 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
PRIM1-203ENST00000548173 ANKRD33Q7Z3H0 272 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 SRBD1Q8N5C6 995 aaKnown RBP9.17□□□□□ -0.94
PRIM1-203ENST00000548173 FANCBQ8NB91 859 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 SCFD2Q8WU76 684 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 TCEANC2Q96MN5 208 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 TOX2Q96NM4 488 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 IWS1Q96ST2 819 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 LZTS2Q9BRK4 669 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 AP5M1Q9H0R1 490 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 SLC12A7Q9Y666 1083 aa9.17□□□□□ -0.94
PRIM1-203ENST00000548173 TRIM43BA6NCK2 446 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 GCOM1H8Y6P7 765 aaPredicted RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 NR3C2P08235 984 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 HMGB1P09429 215 aaKnown RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 POLR2MP0CAP2 368 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 HOXA13P31271 388 aaPredicted RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 MDM2Q00987 491 aaPredicted RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 PPP2R5BQ15173 497 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 STXBP2Q15833 593 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 ARHGEF16Q5VV41 709 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 CCDC62Q6P9F0 684 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 APOA5Q6Q788 366 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 CXCL17Q6UXB2 119 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 RAB11FIP4Q86YS3 637 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 TRIM43Q96BQ3 446 aaPredicted RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 RRP36Q96EU6 259 aaKnown RBP9.16□□□□□ -0.94
PRIM1-203ENST00000548173 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 BRPF3Q9ULD4 1205 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 SNX14Q9Y5W7 946 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 DNAH12Q6ZR08 3092 aa9.16□□□□□ -0.94
PRIM1-203ENST00000548173 GRIN2DO15399 1336 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 A0A0U1RQG5 324 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 DCDC2CA8MYV0 355 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 ARVCFO00192 962 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 KIAA0355O15063 1070 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 EPB41L2O43491 1005 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 ZEB2O60315 1214 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 PQBP1O60828 265 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 EIF3JO75822 258 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 CABYRO75952 493 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 ARIH2O95376 493 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 CLTBP09497 229 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 TXNP10599 105 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 EIF2AK2P19525 551 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 FAAP100Q0VG06 881 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 SEPT14Q6ZU15 432 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 MICU3Q86XE3 530 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 SLC43A3Q8NBI5 491 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 COPS5Q92905 334 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 VTI1AQ96AJ9 217 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 LBHD1Q9BQE6 289 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
PRIM1-203ENST00000548173 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 PRDM5Q9NQX1 630 aaPredicted RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 SEC63Q9UGP8 760 aaKnown RBP9.15□□□□□ -0.94
PRIM1-203ENST00000548173 LTBP2Q14767 1821 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms