RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 VAT1LQ9HCJ6 419 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ZSWIM5Q9P217 1185 aa7.86□□□□□ -1.15
SCAF11-211ENST00000547950 ELP1O95163 1332 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 KIAA0355O15063 1070 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CTAGE5O15320 804 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CST5P28325 142 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CDK7P50613 346 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 EPHB4P54760 987 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CAMK2BQ13554 666 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 FSCN1Q16658 493 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 USH1GQ495M9 461 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CCDC178Q5BJE1 867 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 GPATCH4Q5T3I0 446 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 RNF207Q6ZRF8 634 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 TLK2Q86UE8 772 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 CLEC4DQ8WXI8 215 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 UBAC1Q9BSL1 405 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 KRT23Q9C075 422 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 UPF3AQ9H1J1 476 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 IL25Q9H293 177 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 MTMR10Q9NXD2 777 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 ADD3Q9UEY8 706 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 GNEQ9Y223 722 aaKnown RBP7.85□□□□□ -1.15
SCAF11-211ENST00000547950 A0A0G2JMZ2 1700 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 ZNF236Q9UL36 1845 aa7.85□□□□□ -1.15
SCAF11-211ENST00000547950 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ARVCFO00192 962 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ZEB2O60315 1214 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 TIMP1P01033 207 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 PARP1P09874 1014 aaKnown RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 SNHG28P0DPA3 235 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 GSPT1P15170 499 aaKnown RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ALDH5A1P51649 535 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 PSMC6P62333 389 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 RPS6P62753 249 aaKnown RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 FPGSQ05932 587 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 PDE4DQ08499 809 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 TTC22Q5TAA0 569 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 SLC30A10Q6XR72 485 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ADGRF4Q8IZF3 695 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ENAHQ8N8S7 591 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-211ENST00000547950 TBC1D5Q92609 795 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 DDX12PQ92771 950 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 WDR11Q9BZH6 1224 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 CNNM2Q9H8M5 875 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 VTA1Q9NP79 307 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 PNMA2Q9UL42 364 aa7.84□□□□□ -1.15
SCAF11-211ENST00000547950 TNKSO95271 1327 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 B4DLN1 442 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 TLR3O15455 904 aaKnown RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 CHMLP26374 656 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 CYP2C18P33260 490 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 MRPL12P52815 198 aaKnown RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 NKX3-2P78367 333 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 PTH1RQ03431 593 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 TRDNQ13061 729 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 ITGA7Q13683 1181 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 CDC37Q16543 378 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 DUSP28Q4G0W2 176 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 IFIT1BQ5T764 474 aaKnown RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 FAM126BQ8IXS8 530 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 MORC4Q8TE76 937 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 RUFY2Q8WXA3 655 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 RNPC3Q96LT9 517 aaKnown RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 MPHOSPH6Q99547 160 aaKnown RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 PPP1R12CQ9BZL4 782 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 TRPV6Q9H1D0 765 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 TBX21Q9UL17 535 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 Q9Y3F1 56 aa7.83□□□□□ -1.16
SCAF11-211ENST00000547950 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-211ENST00000547950 GRIN2DO15399 1336 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 MROH7Q68CQ1 1323 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 MYH7P12883 1935 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 SZT2Q5T011 3432 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 CABYRO75952 493 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 MYL3P08590 195 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 ACRP10323 421 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 TXNP10599 105 aaKnown RBP7.82□□□□□ -1.16
SCAF11-211ENST00000547950 CSF2RAP15509 400 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 NT5C2P49902 561 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 CHMP4BP1P59074 171 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 SMAD3P84022 425 aaKnown RBP7.82□□□□□ -1.16
SCAF11-211ENST00000547950 QRICH1Q2TAL8 776 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 ASPRV1Q53RT3 343 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 C6orf132Q5T0Z8 1188 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 ZNF697Q5TEC3 545 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 FAM109BQ6ICB4 259 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-211ENST00000547950 MFSD5Q6N075 450 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 CYB5R4Q7L1T6 521 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 FBXO11Q86XK2 927 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 MCF2L2Q86YR7 1114 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 STAG2Q8N3U4 1231 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 TMEM199Q8N511 208 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 TAAR1Q96RJ0 339 aa7.82□□□□□ -1.16
SCAF11-211ENST00000547950 EPAS1Q99814 870 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms