RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NSUN6Q8TEA1 469 aaKnown RBP16.76■□□□□ 0.27
COL2A1-209ENST00000546974 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 TAAR1Q96RJ0 339 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-209ENST00000546974 TTYH1Q9H313 450 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-209ENST00000546974 HIPK3Q9H422 1215 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
COL2A1-209ENST00000546974 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
COL2A1-209ENST00000546974 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-209ENST00000546974 A6NJR5 290 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 KLRF2D3W0D1 207 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 KPNA6O60684 536 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 MYL3P08590 195 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
COL2A1-209ENST00000546974 RASIP1Q5U651 963 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 CDX2Q99626 313 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-209ENST00000546974 AMNQ9BXJ7 453 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 TRPV6Q9H1D0 765 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
COL2A1-209ENST00000546974 IL23AQ9NPF7 189 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 COL20A1Q9P218 1284 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 MYO9BQ13459 2157 aa16.75■□□□□ 0.27
COL2A1-209ENST00000546974 ERICH2A1L162 156 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 E7EWF7 191 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 ACRP10323 421 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 GHRHRQ02643 423 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 CCDC62Q6P9F0 684 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 ZNF365Q70YC5 407 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
COL2A1-209ENST00000546974 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 COPS5Q92905 334 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
COL2A1-209ENST00000546974 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
COL2A1-209ENST00000546974 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
COL2A1-209ENST00000546974 ZBTB5O15062 677 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 ARIH2O95376 493 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 SUPT20HL2P0C7V6 817 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 GRM4Q14833 912 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
COL2A1-209ENST00000546974 STXBP2Q15833 593 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 HERVK_113Q902F9 699 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 MAP4K1Q92918 833 aa16.73■□□□□ 0.27
COL2A1-209ENST00000546974 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
COL2A1-209ENST00000546974 UMODL1Q5DID0 1318 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 CFBP00751 764 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 DNAJB2P25686 324 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 HSD17B4P51659 736 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 CCL23P55773 120 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 TRAF1Q13077 416 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 WTAPQ15007 396 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 NBPF20Q3BBV1 942 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 RIOX1Q9H6W3 641 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 PXMP2Q9NR77 195 aa16.72■□□□□ 0.27
COL2A1-209ENST00000546974 OPLAHO14841 1288 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 PPP1R11O60927 126 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 EIF3JO75822 258 aaKnown RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 GH1P01241 217 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 FGBP02675 491 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 PTPN11Q06124 597 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 TRMT13Q9NUP7 481 aaKnown RBP16.71■□□□□ 0.27
COL2A1-209ENST00000546974 PCDHA1Q9Y5I3 950 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
COL2A1-209ENST00000546974 CHD9Q3L8U1 2897 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 NR3C2P08235 984 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 EIF2AK2P19525 551 aaKnown RBP16.7■□□□□ 0.26
COL2A1-209ENST00000546974 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 TROAPQ12815 778 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 SLC35G1Q2M3R5 365 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 FAM47CQ5HY64 1035 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 CHST3Q7LGC8 479 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 IGDCC4Q8TDY8 1250 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 MYLIPQ8WY64 445 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 TIFAQ96CG3 184 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 SENP2Q9HC62 589 aa16.7■□□□□ 0.26
COL2A1-209ENST00000546974 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
COL2A1-209ENST00000546974 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
COL2A1-209ENST00000546974 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-209ENST00000546974 DLL1O00548 723 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 CYTH3O43739 400 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 CYP2C9P11712 490 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 ANTXR2P58335 489 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 TMEM67Q5HYA8 995 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-209ENST00000546974 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-209ENST00000546974 PIGSQ96S52 555 aa16.69■□□□□ 0.26
COL2A1-209ENST00000546974 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms