RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	KARS	Q15046	597 aa	Known RBP	10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	SLC15A2	Q16348	729 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	MSL1	Q68DK7	614 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	KRT40	Q6A162	431 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	WDR93	Q6P2C0	686 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	CEP57L1	Q8IYX8	460 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	BAIAP2L1	Q9UHR4	511 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	RTCB	Q9Y3I0	505 aa	Known RBP	10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	L3MBTL1	Q9Y468	752 aa		10.87	□□□□□ -0.67
NEK6-215	ENST00000546191	FAM237A	A0A1B0GTK4	181 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	GOLGA8A	A7E2F4	631 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	IPO5	O00410	1097 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	E2F6	O75461	281 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	LGR5	O75473	907 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	IFNAR1	P17181	557 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	IARS	P41252	1262 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	ABL2	P42684	1182 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	NDUFA8	P51970	172 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	R3HDM1	Q15032	1099 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	ENOX2	Q16206	610 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TSNAXIP1	Q2TAA8	658 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	MFSD6	Q6ZSS7	791 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	VPS37D	Q86XT2	251 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	NOA1	Q8NC60	698 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	WASF1	Q92558	559 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	BPIFA3	Q9BQP9	254 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	RNF41	Q9H4P4	317 aa	Predicted RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SENP2	Q9HC62	589 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	PHF24	Q9UPV7	400 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TACC3	Q9Y6A5	838 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	ECM29	Q5VYK3	1845 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	EIF4E1B	A6NMX2	242 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	IFIT3	O14879	490 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TUBB	P07437	444 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	PARP1	P09874	1014 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	GNAQ	P50148	359 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TUBB4B	P68371	445 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SCN7A	Q01118	1682 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SLC10A5	Q5PT55	438 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	C6orf89	Q6UWU4	347 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	RAB11FIP4	Q86YS3	637 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TMEM139	Q8IV31	216 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	LCORL	Q8N3X6	602 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	ZNF473	Q8WTR7	871 aa	Known RBP	10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	TEKT4	Q8WW24	435 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	DTNBP1	Q96EV8	351 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	FAM167B	Q9BTA0	163 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	OCEL1	Q9H607	264 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	KIAA1468	Q9P260	1216 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	C2CD2	Q9Y426	696 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SLC12A7	Q9Y666	1083 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	SLC4A4	Q9Y6R1	1079 aa		10.86	□□□□□ -0.67
NEK6-215	ENST00000546191	DPPA5	A6NC42	116 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	ARHGAP6	O43182	974 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	RANBP6	O60518	1105 aa	Known RBP	10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	CA8	P35219	290 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	CTDSPL2	Q05D32	466 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	SLMAP	Q14BN4	828 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	CCDC121	Q6ZUS5	278 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	TOGARAM2	Q6ZUX3	1019 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	MICU3	Q86XE3	530 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	SDF4	Q9BRK5	362 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	PREB	Q9HCU5	417 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	GJB4	Q9NTQ9	266 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	GALNT8	Q9NY28	637 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	UTP6	Q9NYH9	597 aa	Known RBP	10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	WDR35	Q9P2L0	1181 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	VCAM1	P19320	739 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	SKOR1	P84550	965 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	SSRP1	Q08945	709 aa	Known RBP	10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	XRCC4	Q13426	336 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	PTPA	Q15257	358 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	BICDL1	Q6ZP65	573 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	OGFOD1	Q8N543	542 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	ZWILCH	Q9H900	591 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	SLC5A4	Q9NY91	659 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	LRP2BP	Q9P2M1	347 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	COL4A1	P02462	1669 aa		10.85	□□□□□ -0.67
NEK6-215	ENST00000546191	PDS5A	Q29RF7	1337 aa	Known RBP	10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	PRKAB2	O43741	272 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	RHBDL3	P58872	404 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	ELF3	P78545	371 aa	Predicted RBP	10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	TRIM29	Q14134	588 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	PPP2R5B	Q15173	497 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	KBTBD12	Q3ZCT8	623 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	TRAPPC3L	Q5T215	181 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	DPY19L2	Q6NUT2	758 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	CCDC24	Q8N4L8	307 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	AIFM3	Q96NN9	605 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	MAP3K14	Q99558	947 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	OSBPL1A	Q9BXW6	950 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	HPSE	Q9Y251	543 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	SPDYE5	A6NIY4	337 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	SEMA3E	O15041	775 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	FUT4	P22083	530 aa		10.84	□□□□□ -0.67
NEK6-215	ENST00000546191	HDLBP	Q00341	1268 aa	Known RBP	10.84	□□□□□ -0.67

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