RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 ADCK5Q3MIX3 580 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 CXCL17Q6UXB2 119 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 TDHQ8IZJ6 230 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 SCFD2Q8WU76 684 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 VTI1AQ96AJ9 217 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 IWS1Q96ST2 819 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 SPZ1Q9BXG8 430 aa23.26■■□□□ 1.31
PRPF19-207ENST00000546152 MAP3K20Q9NYL2 800 aaKnown RBP23.26■■□□□ 1.31
PRPF19-207ENST00000546152 A0A0U1RQG5 324 aaPredicted RBP23.25■■□□□ 1.31
PRPF19-207ENST00000546152 ITGB8P26012 769 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 SMARCA1P28370 1054 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 TRAF1Q13077 416 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 SGMS1Q86VZ5 419 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 SAMD3Q8N6K7 520 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 PXMP2Q9NR77 195 aa23.25■■□□□ 1.31
PRPF19-207ENST00000546152 DCDC2CA8MYV0 355 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 ARVCFO00192 962 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 SOX1O00570 391 aaPredicted RBP23.24■■□□□ 1.31
PRPF19-207ENST00000546152 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 ARIH2O95376 493 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 PLEKHA8P1O95397 391 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 RXRAP19793 462 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 ARHGEF16Q5VV41 709 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 SRBD1Q8N5C6 995 aaKnown RBP23.24■■□□□ 1.31
PRPF19-207ENST00000546152 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 BADQ92934 168 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 LZTS2Q9BRK4 669 aa23.24■■□□□ 1.31
PRPF19-207ENST00000546152 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 NKRFO15226 690 aaKnown RBP eCLIP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 ZEB2O60315 1214 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 CABYRO75952 493 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 CALM1P0DP23 149 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 CALM2P0DP24 149 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 CALM3P0DP25 149 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 TXNP10599 105 aaKnown RBP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 EIF2AK2P19525 551 aaKnown RBP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 HOXA13P31271 388 aaPredicted RBP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 GNAQP50148 359 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 STXBP2Q15833 593 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 CCDC62Q6P9F0 684 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 DHX32Q7L7V1 743 aaKnown RBP23.23■■□□□ 1.31
PRPF19-207ENST00000546152 RAB11FIP4Q86YS3 637 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 SLC43A3Q8NBI5 491 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 COPS5Q92905 334 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 KCNB2Q92953 911 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 TMEM39AQ9NV64 488 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 SLC12A7Q9Y666 1083 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 GRIN2DO15399 1336 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 LAMA3Q16787 3333 aa23.23■■□□□ 1.31
PRPF19-207ENST00000546152 NR3C2P08235 984 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 KRT32Q14532 448 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 CMTR1Q8N1G2 835 aaKnown RBP23.22■■□□□ 1.31
PRPF19-207ENST00000546152 FANCBQ8NB91 859 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 OR6J1Q8NGC5 347 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
PRPF19-207ENST00000546152 TCEANC2Q96MN5 208 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 MROH7Q68CQ1 1323 aa23.22■■□□□ 1.31
PRPF19-207ENST00000546152 GCOM1H8Y6P7 765 aaPredicted RBP23.21■■□□□ 1.31
PRPF19-207ENST00000546152 POLR2MP0CAP2 368 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 TTLL4Q14679 1199 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 LRIT3Q3SXY7 679 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 SEPT14Q6ZU15 432 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 FAM126BQ8IXS8 530 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 PDCD2LQ9BRP1 358 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 TBX21Q9UL17 535 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 SZT2Q5T011 3432 aa23.21■■□□□ 1.31
PRPF19-207ENST00000546152 EIF3JO75822 258 aaKnown RBP23.2■■□□□ 1.3
PRPF19-207ENST00000546152 HSPA4P34932 840 aa23.2■■□□□ 1.3
PRPF19-207ENST00000546152 CPT1AP50416 773 aa23.2■■□□□ 1.3
PRPF19-207ENST00000546152 ITGA7Q13683 1181 aa23.2■■□□□ 1.3
PRPF19-207ENST00000546152 APOA5Q6Q788 366 aa23.2■■□□□ 1.3
PRPF19-207ENST00000546152 LRCH3Q96II8 777 aa23.2■■□□□ 1.3
PRPF19-207ENST00000546152 A6NJR5 290 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 CD4P01730 458 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 RAG1P15918 1043 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 PSMC6P62333 389 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 PURAQ00577 322 aaKnown RBP23.19■■□□□ 1.3
PRPF19-207ENST00000546152 LY6KQ17RY6 165 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 MICU3Q86XE3 530 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 POLR3EQ9NVU0 708 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
PRPF19-207ENST00000546152 PGM5Q15124 567 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 TMTC3Q6ZXV5 915 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 FCHSD1Q86WN1 690 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 IL31RAQ8NI17 732 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 SEC63Q9UGP8 760 aaKnown RBP23.18■■□□□ 1.3
PRPF19-207ENST00000546152 SNX14Q9Y5W7 946 aa23.18■■□□□ 1.3
PRPF19-207ENST00000546152 RGS20O76081 388 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 TIMP1P01033 207 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 MYL3P08590 195 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
PRPF19-207ENST00000546152 MYCLP12524 364 aaPredicted RBP23.17■■□□□ 1.3
PRPF19-207ENST00000546152 CPA1P15085 419 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 ARHGAP1Q07960 439 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 SYNE3Q6ZMZ3 975 aa23.17■■□□□ 1.3
PRPF19-207ENST00000546152 CCDC82Q8N4S0 544 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms