RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 TTLL3Q9Y4R7 772 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 ARPP19P56211 112 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 KIAA1841Q6NSI8 718 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 IFT81Q8WYA0 676 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 STRBPQ96SI9 672 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 MAGEF1Q9HAY2 307 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 CBX8Q9HC52 389 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 PCDHA6Q9UN73 950 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 PCDHA8Q9Y5H6 950 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 ATP8B3O60423 1300 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 ABCB11O95342 1321 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 ERICH4A6NGS2 130 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 HNRNPDLO14979 420 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 MYO5BQ9ULV0 1848 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 MMP1P03956 469 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 SCYL2Q6P3W7 929 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 GBP6Q6ZN66 633 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 AK8Q96MA6 479 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 MST1RQ04912 1400 aa9.94□□□□□ -0.82
MTHFD1-202ENST00000545908 POLR3GO15318 223 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 KIF11P52732 1056 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 UAP1Q16222 522 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 C7orf31Q8N865 590 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 DISC1Q9NRI5 854 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 HESX1Q9UBX0 185 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 PCDHB4Q9Y5E5 795 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SMIM23A6NLE4 172 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SPP2Q13103 211 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 CEP128Q6ZU80 1094 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 RRAGAQ7L523 313 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 DEFB132Q7Z7B7 95 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 LARP4BQ92615 738 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 FAM84BQ96KN1 310 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 TMEM106CQ9BVX2 250 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SRGAP2CP0DJJ0 459 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ZNF34Q8IZ26 560 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 MTMR1Q13613 665 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SYCE1Q8N0S2 351 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 TCP11Q8WWU5 503 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 CCDC127Q96BQ5 260 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SELENOSQ9BQE4 189 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 PLA2G12BQ9BX93 195 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 NUCKS1Q9H1E3 243 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 CRCPO75575 148 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 JAK3P52333 1124 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SLFNL1Q499Z3 407 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ELMSAN1Q6PJG2 1045 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ZFYVE28Q9HCC9 887 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 COPB2P35606 906 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 CALCOCO2Q13137 446 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ADAM9Q13443 819 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 U2AF1L4Q8WU68 220 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 GCNAQ96QF7 691 aa9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 FAM207AQ9NSI2 230 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-202ENST00000545908 GOLGA6CA6NDK9 693 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 GOLGA6BA6NDN3 693 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 GOLGA6DP0CG33 693 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 SNAPC2Q13487 334 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 TTLL4Q14679 1199 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 MICALCLQ6ZW33 695 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 TRIM50Q86XT4 487 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 GABPB2Q8TAK5 448 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 NLRP4Q96MN2 994 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 MXD3Q9BW11 206 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 GOLGA6AQ9NYA3 693 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 NFE2L3Q9Y4A8 694 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 ZBTB5O15062 677 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 PTPREP23469 700 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 MTMR2Q13614 643 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 RNF187Q5TA31 235 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 ANGEL2Q5VTE6 544 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 CEP95Q96GE4 821 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 RMDN3Q96TC7 470 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 PPP6R2O75170 966 aa9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 CELF2O95319 508 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-202ENST00000545908 NT5C2P49902 561 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms