RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 BAZ2AQ9UIF9 1905 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-216ENST00000545663 GVINP1Q7Z2Y8 2422 aa18.47■□□□□ 0.55
CLSTN3-216ENST00000545663 ZNF292O60281 2723 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 PROB1E7EW31 1015 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 MBD4O95243 580 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 AVPR2P30518 371 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 GTF2F1P35269 517 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 IKBKEQ14164 716 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 GDF6Q6KF10 455 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 COPS5Q92905 334 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 ATP8A2Q9NTI2 1148 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 CYP39A1Q9NYL5 469 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 NYAP2Q9P242 653 aa18.46■□□□□ 0.55
CLSTN3-216ENST00000545663 PRR23AA6NEV1 266 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 CHGBP05060 677 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 ALAS1P13196 640 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 HTRA4P83105 476 aaPredicted RBP18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 PTPN11Q06124 597 aaPredicted RBP18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 HYAL1Q12794 435 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 CTR9Q6PD62 1173 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 SP7Q8TDD2 431 aaPredicted RBP18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 MORC4Q8TE76 937 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
CLSTN3-216ENST00000545663 FRYLO94915 3013 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 LINC01565O15544 149 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 CKBP12277 381 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 RASA1P20936 1047 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 MBTPS1Q14703 1052 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 NCOR2Q9Y618 2525 aa18.44■□□□□ 0.54
CLSTN3-216ENST00000545663 MED19A0JLT2 244 aaPredicted RBP18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 GOLIM4O00461 696 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 TBX10O75333 385 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 SMAD4Q13485 552 aaKnown RBP18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 TMEM192Q8IY95 271 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 LRRC47Q8N1G4 583 aaKnown RBP18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 ASIC4Q96FT7 647 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 IGFLR1Q9H665 355 aa18.43■□□□□ 0.54
CLSTN3-216ENST00000545663 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 A6NJR5 290 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 MKRN4PQ13434 485 aaPredicted RBP18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 NSMFQ6X4W1 530 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 MYOCDQ8IZQ8 938 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 IRF2BPLQ9H1B7 796 aa18.42■□□□□ 0.54
CLSTN3-216ENST00000545663 CSPG5O95196 566 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 PDGFBP01127 241 aaPredicted RBP18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 AACSQ86V21 672 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 FBXO11Q86XK2 927 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 WNT8BQ93098 351 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 CD207Q9UJ71 328 aa18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
CLSTN3-216ENST00000545663 IGKV6D-41A0A0C4DH26 115 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 LOC730098B7Z3J9 87 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 NCK2O43639 380 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 KPNA6O60684 536 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 EFCAB14O75071 495 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 LGR5O75473 907 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 BMP3P12645 472 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 SIGLEC14Q08ET2 396 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 BRDTQ58F21 947 aaPredicted RBP18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 ZNF618Q5T7W0 954 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 SAMD11Q96NU1 681 aa18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
CLSTN3-216ENST00000545663 LCTP09848 1927 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 GRM6O15303 877 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 KDM4AO75164 1064 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 AMHP03971 560 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 ALDH5A1P51649 535 aaPredicted RBP18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 RBL2Q08999 1139 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 SLFN13Q68D06 897 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 MKL1Q969V6 931 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
CLSTN3-216ENST00000545663 UPP2O95045 317 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 BAATQ14032 418 aaPredicted RBP18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 KAT2BQ92831 832 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 YME1L1Q96TA2 773 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 MKNK2Q9HBH9 465 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 CFAP47Q6ZTR5 3102 aa18.38■□□□□ 0.53
CLSTN3-216ENST00000545663 PARNO95453 639 aaKnown RBP18.37■□□□□ 0.53
CLSTN3-216ENST00000545663 TRIM27P14373 513 aa18.37■□□□□ 0.53
CLSTN3-216ENST00000545663 ADD2P35612 726 aa18.37■□□□□ 0.53
CLSTN3-216ENST00000545663 NBL1P41271 181 aa18.37■□□□□ 0.53
CLSTN3-216ENST00000545663 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
CLSTN3-216ENST00000545663 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms