RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 GJB5O95377 273 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
RTN3-214ENST00000545432 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 MAF1Q9H063 256 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 UBE2ZQ9H832 354 aaPredicted RBP17.43■□□□□ 0.38
RTN3-214ENST00000545432 PNMA2Q9UL42 364 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 RAD50Q92878 1312 aa17.43■□□□□ 0.38
RTN3-214ENST00000545432 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 KCNJ6P48051 423 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 FAM47CQ5HY64 1035 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 TTBK2Q6IQ55 1244 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 CCDC62Q6P9F0 684 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 RASGRP2Q7LDG7 609 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 GJD3Q8N144 294 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 DHX38Q92620 1227 aaKnown RBP17.42■□□□□ 0.38
RTN3-214ENST00000545432 TGS1Q96RS0 853 aaKnown RBP17.42■□□□□ 0.38
RTN3-214ENST00000545432 RAD9AQ99638 391 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 ANAPC4Q9UJX5 808 aa17.42■□□□□ 0.38
RTN3-214ENST00000545432 ABHD14A-ACY1A0A1B0GW23 586 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 LINC01553A4QN01 128 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 NMT2O60551 498 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 SELPP16109 830 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 PTGISQ16647 500 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 ZMYM1Q5SVZ6 1142 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 ALYREFQ86V81 257 aaKnown RBP17.41■□□□□ 0.38
RTN3-214ENST00000545432 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 KAT2BQ92831 832 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 COPS5Q92905 334 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 SEC62Q99442 399 aaKnown RBP17.41■□□□□ 0.38
RTN3-214ENST00000545432 NAPBQ9H115 298 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 TANC1Q9C0D5 1861 aa17.41■□□□□ 0.38
RTN3-214ENST00000545432 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 ORC4O43929 436 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 NBNO60934 754 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 ARIH2O95376 493 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 RPS6P62753 249 aaKnown RBP17.4■□□□□ 0.38
RTN3-214ENST00000545432 DEFB103AP81534 67 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
RTN3-214ENST00000545432 TCTN1Q2MV58 587 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 SYDE2Q5VT97 1194 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 SLC30A10Q6XR72 485 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 CCDC155Q8N6L0 562 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 GDPD5Q8WTR4 605 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 PPP1R13LQ8WUF5 828 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 KCNH6Q9H252 994 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 TCP11L1Q9NUJ3 509 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
RTN3-214ENST00000545432 PTPRSQ13332 1948 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 WDR19Q8NEZ3 1342 aa17.4■□□□□ 0.38
RTN3-214ENST00000545432 EFCAB14O75071 495 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
RTN3-214ENST00000545432 SLC16A2P36021 539 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
RTN3-214ENST00000545432 PDE4DQ08499 809 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 GDF6Q6KF10 455 aaPredicted RBP17.39■□□□□ 0.37
RTN3-214ENST00000545432 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 LRRC8DQ7L1W4 858 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 NEK9Q8TD19 979 aa17.39■□□□□ 0.37
RTN3-214ENST00000545432 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
RTN3-214ENST00000545432 GRXCR2A6NFK2 248 aa17.38■□□□□ 0.37
RTN3-214ENST00000545432 ALADP13716 330 aa17.38■□□□□ 0.37
RTN3-214ENST00000545432 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
RTN3-214ENST00000545432 TMCO2Q7Z6W1 182 aaPredicted RBP17.38■□□□□ 0.37
RTN3-214ENST00000545432 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
RTN3-214ENST00000545432 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
RTN3-214ENST00000545432 MPHOSPH6Q99547 160 aaKnown RBP17.38■□□□□ 0.37
RTN3-214ENST00000545432 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
RTN3-214ENST00000545432 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
RTN3-214ENST00000545432 MMP3P08254 477 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 TOP1P11387 765 aaKnown RBP17.37■□□□□ 0.37
RTN3-214ENST00000545432 CKBP12277 381 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 CALML3P27482 149 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 ALX1Q15699 326 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 PUS10Q3MIT2 529 aaKnown RBP17.37■□□□□ 0.37
RTN3-214ENST00000545432 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 TMEM47Q9BQJ4 181 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 ZBED2Q9BTP6 218 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
RTN3-214ENST00000545432 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
RTN3-214ENST00000545432 B4DLN1 442 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 HAS3O00219 553 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 IL9P15248 144 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
RTN3-214ENST00000545432 HTRA4P83105 476 aaPredicted RBP17.36■□□□□ 0.37
RTN3-214ENST00000545432 CTDSPL2Q05D32 466 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms