RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	TARS2	Q9BW92	718 aa	Known RBP	5.65	□□□□□ -1.5
SNHG1-222	ENST00000545308	MRPL4	Q9BYD3	311 aa	Known RBP	5.65	□□□□□ -1.5
SNHG1-222	ENST00000545308	MKRN2	Q9H000	416 aa	Known RBP	5.65	□□□□□ -1.5
SNHG1-222	ENST00000545308	GP6	Q9HCN6	339 aa		5.65	□□□□□ -1.5
SNHG1-222	ENST00000545308	CNOT6	Q9ULM6	557 aa	Known RBP	5.65	□□□□□ -1.5
SNHG1-222	ENST00000545308	NOTO	A8MTQ0	251 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	S100B	P04271	92 aa	Predicted RBP	5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	BMP7	P18075	431 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	SUMO1	P63165	101 aa	Known RBP	5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	CLEC16A	Q2KHT3	1053 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	ZNF385B	Q569K4	471 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	NSMF	Q6X4W1	530 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	FERMT3	Q86UX7	667 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	TRIM59	Q8IWR1	403 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	ADCY4	Q8NFM4	1077 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	SLC7A14	Q8TBB6	771 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	RCC1L	Q96I51	464 aa	Known RBP	5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	G6PC3	Q9BUM1	346 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	SGPP1	Q9BX95	441 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	CHMP4A	Q9BY43	222 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	ZCCHC4	Q9H5U6	513 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	TRIM39	Q9HCM9	518 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	HOMER2	Q9NSB8	354 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	WHRN	Q9P202	907 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	CHPF2	Q9P2E5	772 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	SUGT1	Q9Y2Z0	365 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	EMC9	Q9Y3B6	208 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	KCTD3	Q9Y597	815 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	NCAPD3	P42695	1498 aa		5.64	□□□□□ -1.51
SNHG1-222	ENST00000545308	DLX3	O60479	287 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	PPM1B	O75688	479 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	DNAJC8	O75937	253 aa	Predicted RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	GALK1	P51570	392 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	ZNF445	P59923	1031 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	NFKB2	Q00653	900 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	SF1	Q15637	639 aa	Known RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	BRDT	Q58F21	947 aa	Predicted RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	TRIM61	Q5EBN2	209 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	TCERG1L	Q5VWI1	586 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	STRA8	Q7Z7C7	330 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	NLRX1	Q86UT6	975 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	LRRTM3	Q86VH5	581 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	ARHGEF39	Q8N4T4	335 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	AFAP1L2	Q8N4X5	818 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	ENOX1	Q8TC92	643 aa	Known RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	BTN2A2	Q8WVV5	523 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	RELT	Q969Z4	430 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	IPO9	Q96P70	1041 aa	Known RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	GBP3	Q9H0R5	595 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	AKT3	Q9Y243	479 aa		5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	THRAP3	Q9Y2W1	955 aa	Known RBP	5.63	□□□□□ -1.51
SNHG1-222	ENST00000545308	BLACE	A4D250	179 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	OR14I1	A6ND48	311 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	SOX5	P35711	763 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	SNW1	Q13573	536 aa	Known RBP	5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	NBPF9	Q3BBW0	867 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	CNNM4	Q6P4Q7	775 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	RNF111	Q6ZNA4	994 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	DDX1	Q92499	740 aa	Known RBP	5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	BRF1	Q92994	677 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	KCNC2	Q96PR1	638 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	INTS7	Q9NVH2	962 aa	Known RBP	5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308	MAPRE3	Q9UPY8	281 aa		5.62	□□□□□ -1.51
SNHG1-222	ENST00000545308		A0A087WZG4	1122 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308		A0A0G2JLL6	359 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	RFXAP	O00287	272 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	NOP56	O00567	594 aa	Known RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	KCNH1	O95259	989 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	EFEMP2	O95967	443 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	ITGA4	P13612	1032 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	RNF4	P78317	190 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	CYP4F3	Q08477	520 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	NMI	Q13287	307 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	FAM50A	Q14320	339 aa	Known RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	SSPN	Q14714	243 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	NTRK3	Q16288	839 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	ODR4	Q5SWX8	454 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	BRAP	Q7Z569	592 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	FGD2	Q7Z6J4	655 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	TMEM151B	Q8IW70	566 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	SIRT2	Q8IXJ6	389 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	RAVER1	Q8IY67	606 aa	Known RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	USHBP1	Q8N6Y0	703 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	MARCH10	Q8NA82	808 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	GSTCD	Q8NEC7	633 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	JDP2	Q8WYK2	163 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	SCLY	Q96I15	445 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	HDAC8	Q9BY41	377 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	SLC52A2	Q9HAB3	445 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	SFMBT1	Q9UHJ3	866 aa		5.61	□□□□□ -1.51
SNHG1-222	ENST00000545308	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.6	□□□□□ -1.51
SNHG1-222	ENST00000545308	HRK	O00198	91 aa		5.6	□□□□□ -1.51
SNHG1-222	ENST00000545308	NRDC	O43847	1150 aa		5.6	□□□□□ -1.51
SNHG1-222	ENST00000545308	EYA4	O95677	639 aa		5.6	□□□□□ -1.51
SNHG1-222	ENST00000545308	RPL10	P27635	214 aa	Known RBP	5.6	□□□□□ -1.51

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