RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 OLFML2BQ68BL8 750 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 BICRALQ6AI39 1079 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 PAQR3Q6TCH7 311 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 LBX2Q6XYB7 198 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 CABP7Q86V35 215 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 HOMER1Q86YM7 354 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 RIOX2Q8IUF8 465 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 IFNL3Q8IZI9 196 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 NETO2Q8NC67 525 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.5□□□□□ -1.85
YBX3-214ENST00000544501 PLEKHO2Q8TD55 490 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 DPF3Q92784 378 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 PHF20Q9BVI0 1012 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 MRPL4Q9BYD3 311 aaKnown RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 ZNF552Q9H707 407 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 TNFRSF12AQ9NP84 129 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 GULP1Q9UBP9 304 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 PCDHA2Q9Y5H9 948 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.5□□□□□ -1.85
YBX3-214ENST00000544501 X6R8D5 127 aa3.5□□□□□ -1.85
YBX3-214ENST00000544501 C22orf46C9J442 243 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 PLD2O14939 933 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 PAX4O43316 350 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 PEX10O60683 326 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 FUCA1P04066 466 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 APPP05067 770 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 LCP1P13796 627 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 PDE6BP35913 854 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 YBX1P67809 324 aaKnown RBP3.49□□□□□ -1.85
YBX3-214ENST00000544501 ADGRF1Q5T601 910 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 MROH9Q5TGP6 573 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 CEP68Q76N32 757 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 SIRT2Q8IXJ6 389 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 USP33Q8TEY7 942 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 APPBP2Q92624 585 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 LIN37Q96GY3 246 aaPredicted RBP3.49□□□□□ -1.85
YBX3-214ENST00000544501 TMEM169Q96HH4 297 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 CDIP1Q9H305 208 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 NCOA5Q9HCD5 579 aaKnown RBP3.49□□□□□ -1.85
YBX3-214ENST00000544501 MARCH2Q9P0N8 246 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 NUDT5Q9UKK9 219 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 TMA7Q9Y2S6 64 aaKnown RBP3.49□□□□□ -1.85
YBX3-214ENST00000544501 RWDD3Q9Y3V2 267 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 TBX22Q9Y458 520 aa3.49□□□□□ -1.85
YBX3-214ENST00000544501 ESYT3A0FGR9 886 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 BLACEA4D250 179 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 LRRC10BA6NIK2 292 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 ENPP3O14638 875 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 WNT9AO14904 365 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 RFPL3O75679 317 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 ZBTB7AO95365 584 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 DBHP09172 617 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 TACR1P25103 407 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 BCL6P41182 706 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 SLC6A11P48066 632 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 MAPKAPK2P49137 400 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 GALK1P51570 392 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 TCEA2Q15560 299 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 CHRNA2Q15822 529 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 FNDC3BQ53EP0 1204 aaKnown RBP3.48□□□□□ -1.85
YBX3-214ENST00000544501 WWC2Q6AWC2 1192 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 GIMAP6Q6P9H5 292 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 KCNT2Q6UVM3 1135 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 C16orf86Q6ZW13 317 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 JAZF1Q86VZ6 243 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 GSTCDQ8NEC7 633 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 TRMT2BQ96GJ1 504 aaKnown RBP3.48□□□□□ -1.85
YBX3-214ENST00000544501 PEX11GQ96HA9 241 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 FMNL2Q96PY5 1086 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 ALG1Q9BT22 464 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 KANSL2Q9H9L4 492 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 DCP1AQ9NPI6 582 aaPredicted RBP3.48□□□□□ -1.85
YBX3-214ENST00000544501 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.48□□□□□ -1.85
YBX3-214ENST00000544501 KLHL14Q9P2G3 628 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 SFMBT1Q9UHJ3 866 aa3.48□□□□□ -1.85
YBX3-214ENST00000544501 COA3Q9Y2R0 106 aaPredicted RBP3.48□□□□□ -1.85
YBX3-214ENST00000544501 MRPL42Q9Y6G3 142 aaKnown RBP3.48□□□□□ -1.85
YBX3-214ENST00000544501 ASXL2Q76L83 1435 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 TEX51A0A1B0GUA7 166 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.47□□□□□ -1.85
YBX3-214ENST00000544501 MSCO60682 206 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 CDC45O75419 566 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 DGKIO75912 1065 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 NTRK1P04629 796 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 GRK2P25098 689 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 GRK3P35626 688 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 PAK1Q13153 545 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 SLC9A5Q14940 896 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 RAB3GAP1Q15042 981 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 MLANAQ16655 118 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 RPTNQ6XPR3 784 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 PRR23BQ6ZRT6 265 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 NLRP10Q86W26 655 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 DCP2Q8IU60 420 aaKnown RBP3.47□□□□□ -1.85
YBX3-214ENST00000544501 TEX2Q8IWB9 1127 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 FBXO15Q8NCQ5 510 aaPredicted RBP3.47□□□□□ -1.85
YBX3-214ENST00000544501 BHLHE22Q8NFJ8 381 aaPredicted RBP3.47□□□□□ -1.85
YBX3-214ENST00000544501 SEC14L1Q92503 715 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 CHAMP1Q96JM3 812 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 AP5M1Q9H0R1 490 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms