RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SYMPKQ92797 1274 aaKnown RBP34.49■■■■□ 3.11
CCM2-219ENST00000544363 TIGD1Q96MW7 591 aa34.49■■■■□ 3.11
CCM2-219ENST00000544363 ASCC2Q9H1I8 757 aaPredicted RBP34.49■■■■□ 3.11
CCM2-219ENST00000544363 CTAGE5O15320 804 aa34.48■■■■□ 3.11
CCM2-219ENST00000544363 STAT3P40763 770 aa34.48■■■■□ 3.11
CCM2-219ENST00000544363 LRSAM1Q6UWE0 723 aa34.48■■■■□ 3.11
CCM2-219ENST00000544363 EPSTI1Q96J88 318 aa34.48■■■■□ 3.11
CCM2-219ENST00000544363 TRPM7Q96QT4 1865 aa34.48■■■■□ 3.11
CCM2-219ENST00000544363 RBM43Q6ZSC3 357 aaKnown RBP34.48■■■■□ 3.11
CCM2-219ENST00000544363 CIITAP33076 1130 aa34.47■■■■□ 3.11
CCM2-219ENST00000544363 POTEEQ6S8J3 1075 aa34.47■■■■□ 3.11
CCM2-219ENST00000544363 A0A0G2JMZ2 1700 aa34.47■■■■□ 3.11
CCM2-219ENST00000544363 RBBP6Q7Z6E9 1792 aaKnown RBP34.46■■■■□ 3.11
CCM2-219ENST00000544363 OSBPP22059 807 aa34.46■■■■□ 3.11
CCM2-219ENST00000544363 PLS1Q14651 629 aa34.46■■■■□ 3.11
CCM2-219ENST00000544363 GTF2A2P52657 109 aa34.45■■■■□ 3.11
CCM2-219ENST00000544363 HERVK_113P62684 666 aa34.45■■■■□ 3.11
CCM2-219ENST00000544363 SYTL5Q8TDW5 730 aaPredicted RBP34.45■■■■□ 3.11
CCM2-219ENST00000544363 COL20A1Q9P218 1284 aa34.45■■■■□ 3.11
CCM2-219ENST00000544363 CETPP11597 493 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 RPS6P62753 249 aaKnown RBP34.44■■■■□ 3.1
CCM2-219ENST00000544363 Q4G0T1 1027 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 MS4A4AQ96JQ5 239 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 SDF4Q9BRK5 362 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 BTBD7Q9P203 1132 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 RNF207Q6ZRF8 634 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 GAS2L3Q86XJ1 694 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 AK8Q96MA6 479 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 MAF1Q9H063 256 aa34.44■■■■□ 3.1
CCM2-219ENST00000544363 GPBP1L1Q9HC44 474 aaPredicted RBP34.44■■■■□ 3.1
CCM2-219ENST00000544363 POLR2DO15514 142 aaKnown RBP34.43■■■■□ 3.1
CCM2-219ENST00000544363 ZBTB48P10074 688 aaPredicted RBP34.43■■■■□ 3.1
CCM2-219ENST00000544363 TXKP42681 527 aa34.43■■■■□ 3.1
CCM2-219ENST00000544363 SPRYD7Q5W111 196 aa34.43■■■■□ 3.1
CCM2-219ENST00000544363 NSMFQ6X4W1 530 aa34.43■■■■□ 3.1
CCM2-219ENST00000544363 CKAP2LQ8IYA6 745 aa34.43■■■■□ 3.1
CCM2-219ENST00000544363 RABGAP1Q9Y3P9 1069 aa34.43■■■■□ 3.1
CCM2-219ENST00000544363 ZNF76P36508 570 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 FXR2P51116 673 aaKnown RBP eCLIP34.42■■■■□ 3.1
CCM2-219ENST00000544363 LONRF3Q496Y0 759 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 HAS1Q92839 578 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 PANK2Q9BZ23 570 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 ACAD9Q9H845 621 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 KCNMB3Q9NPA1 279 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 RPTORQ8N122 1335 aa34.42■■■■□ 3.1
CCM2-219ENST00000544363 FAM86B1E9PN63 330 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 FAM86B2P0C5J1 330 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 TECP42680 631 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 HUNKP57058 714 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 SLC30A10Q6XR72 485 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 KRBA2Q6ZNG9 492 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 MKRN3Q13064 507 aaKnown RBP34.41■■■■□ 3.1
CCM2-219ENST00000544363 TMEM266Q2M3C6 531 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 PRR16Q569H4 304 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 RIOX2Q8IUF8 465 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 PDILTQ8N807 584 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 IGSF22Q8N9C0 903 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 CHST13Q8NET6 341 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 LENG9Q96B70 501 aa34.41■■■■□ 3.1
CCM2-219ENST00000544363 A0A087X0B3 334 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 CCL15-CCL14A0A0B4J2E2 113 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 MARCH6O60337 910 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 TXLNAP40222 546 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 BAATQ14032 418 aaPredicted RBP34.4■■■■□ 3.1
CCM2-219ENST00000544363 CCL15Q16663 113 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 CNNM3Q8NE01 707 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 SLC45A1Q9Y2W3 748 aa34.4■■■■□ 3.1
CCM2-219ENST00000544363 TBX3O15119 743 aa34.39■■■■□ 3.1
CCM2-219ENST00000544363 UBXN2AP68543 259 aa34.39■■■■□ 3.1
CCM2-219ENST00000544363 SPATC1LQ9H0A9 340 aa34.39■■■■□ 3.1
CCM2-219ENST00000544363 PNMA3Q9UL41 463 aa34.39■■■■□ 3.1
CCM2-219ENST00000544363 FRMPD4Q14CM0 1322 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 PASKQ96RG2 1323 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 FSD2A1L4K1 749 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 CNMDO75829 334 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 CDC25AP30304 524 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 PDIA5Q14554 519 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 ELOA2Q8IYF1 753 aaPredicted RBP34.38■■■■□ 3.09
CCM2-219ENST00000544363 SLFN12Q8IYM2 578 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 TAAR1Q96RJ0 339 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 PYM1Q9BRP8 204 aaKnown RBP34.38■■■■□ 3.09
CCM2-219ENST00000544363 PAGR1Q9BTK6 254 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 FUCA2Q9BTY2 467 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 RAB34Q9BZG1 259 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 CCSER1Q9C0I3 900 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 TTC12Q9H892 705 aaPredicted RBP34.38■■■■□ 3.09
CCM2-219ENST00000544363 SERTAD1Q9UHV2 236 aa34.38■■■■□ 3.09
CCM2-219ENST00000544363 GOLGA6L3A6NEY3 463 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 PEX10O60683 326 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 UBA7P41226 1012 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 ETNPPLQ8TBG4 499 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 BRI3BPQ8WY22 251 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 TSPY26PQ9H489 355 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 IGLV3-22A0A075B6J6 115 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 PP2D1A8MPX8 630 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 CYP2W1Q8TAV3 490 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 DHX58Q96C10 678 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 RBPJLQ9UBG7 517 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 FBXO40Q9UH90 709 aa34.37■■■■□ 3.09
CCM2-219ENST00000544363 USP25Q9UHP3 1055 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms