RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 ATP2C1P98194 919 aaPredicted RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 DCAF17Q5H9S7 520 aaPredicted RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PAPD7Q5XG87 772 aaKnown RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 AP1ARQ63HQ0 302 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ANKRD40Q6AI12 368 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 OR2W6PQ8NHA6 318 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ZNF473Q8WTR7 871 aaKnown RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ADSSL1Q8N142 457 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 C6orf50Q9HD87 102 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 NIP7Q9Y221 180 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PCDH11XQ9BZA7 1347 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PCDH11YQ9BZA8 1340 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 IL2RBP14784 551 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 IFNAR2P48551 515 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 AARSP49588 968 aaKnown RBP eCLIP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 GNAQP50148 359 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 PMS1P54277 932 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 ASIC2Q16515 512 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 CCDC26Q8TAB7 109 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 KANSL2Q9H9L4 492 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 A0A1W2PQC6 194 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 SETSIPP0DME0 302 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 IKQ13123 557 aaPredicted RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 PEX26Q7Z412 305 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 MICAL1Q8TDZ2 1067 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 STK38LQ9Y2H1 464 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 ZSCAN5CA6NGD5 496 aaPredicted RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 FOXP2O15409 715 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 PSEN1P49768 467 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 AMPD2Q01433 879 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 NLRP10Q86W26 655 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 EPN3Q9H201 632 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.93e-6■■□□□ 11.6
ABCB1-210ENST00000543898 UTP11Q9Y3A2 253 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 KIF4AO95239 1232 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 TMOD1P28289 359 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 SLC1A4P43007 532 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 KCTD19Q17RG1 926 aaPredicted RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 CCDC50Q8IVM0 306 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
ABCB1-210ENST00000543898 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 KCNK9Q9NPC2 374 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
ABCB1-210ENST00000543898 SRGNP10124 158 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 PDE6BP35913 854 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 NONOQ15233 471 aaKnown RBP eCLIP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 ALX1Q15699 326 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 ATP6V1G3Q96LB4 118 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 ATP8A1Q9Y2Q0 1164 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 GOLGA6L10A0A0M3HER8 536 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 CTNND1O60716 968 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 GCKP35557 465 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 STK4Q13043 487 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 VWA3BQ502W6 1294 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 FAM133BQ5BKY9 247 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 KIRREL3Q8IZU9 778 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 XRN1Q8IZH2 1706 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 GMNCA6NCL1 334 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 HMGB1P1B2RPK0 211 aaPredicted RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 OR52Z1P0C646 297 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 MDH1P40925 334 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 PPP1R2P41236 205 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 FAM133AQ8N9E0 248 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 GNA11P29992 359 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 MAN2A1Q16706 1144 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
ABCB1-210ENST00000543898 KAT2BQ92831 832 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 DNAJC7Q99615 494 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 ISCA1Q9BUE6 129 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
ABCB1-210ENST00000543898 TPD52L2O43399 206 aaKnown RBP9.42□□□□□ -0.9
ABCB1-210ENST00000543898 DDX42Q86XP3 938 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms