RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CDC27P30260 824 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 AKAP17AQ02040 695 aaKnown RBP12.75□□□□□ -0.37
DDB1-222ENST00000543627 STXBP2Q15833 593 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 KCNA10Q16322 511 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 LRRC26Q2I0M4 334 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 IQSEC1Q6DN90 963 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 TAPT1Q6NXT6 567 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
DDB1-222ENST00000543627 OPLAHO14841 1288 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
DDB1-222ENST00000543627 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
DDB1-222ENST00000543627 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
DDB1-222ENST00000543627 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 NAPAP54920 295 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 USP17L6PQ6QN14 398 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 COPS5Q92905 334 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 PSTPIP2Q9H939 334 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
DDB1-222ENST00000543627 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 ADAMTS4O75173 837 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 NR3C2P08235 984 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 COL6A1P12109 1028 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 HSD17B4P51659 736 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 ACLYP53396 1101 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 UBE2SQ16763 222 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
DDB1-222ENST00000543627 SLC39A5Q6ZMH5 540 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 PHKBQ93100 1093 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
DDB1-222ENST00000543627 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
DDB1-222ENST00000543627 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 RTEL1Q9NZ71 1219 aa12.73□□□□□ -0.37
DDB1-222ENST00000543627 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 CPLX1O14810 134 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 ZEB2O60315 1214 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 ASGR1P07306 291 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 MYL3P08590 195 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 PDIA3P30101 505 aaKnown RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 GJA9P57773 515 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 RTP1P59025 263 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 TTLL4Q14679 1199 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 FSCN1Q16658 493 aaKnown RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 LY6KQ17RY6 165 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 WWC2Q6AWC2 1192 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 PCSK9Q8NBP7 692 aaKnown RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 MORC4Q8TE76 937 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 GLT1D1Q96MS3 346 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 TM6SF1Q9BZW5 370 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
DDB1-222ENST00000543627 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
DDB1-222ENST00000543627 PDE4DIPQ5VU43 2346 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
DDB1-222ENST00000543627 DTNBO60941 627 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
DDB1-222ENST00000543627 CCND2P30279 289 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 PGM5Q15124 567 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
DDB1-222ENST00000543627 TRIM60Q495X7 471 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 KLHDC9Q8NEP7 349 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 PDCD2LQ9BRP1 358 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
DDB1-222ENST00000543627 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
DDB1-222ENST00000543627 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 ARIH2O95376 493 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 EDNRBP24530 442 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 NEK4P51957 841 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 BRDTQ58F21 947 aaPredicted RBP12.7□□□□□ -0.38
DDB1-222ENST00000543627 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 PPP1R13LQ8WUF5 828 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 PGBD1Q96JS3 809 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
DDB1-222ENST00000543627 MAF1Q9H063 256 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
DDB1-222ENST00000543627 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 LCTP09848 1927 aa12.7□□□□□ -0.38
DDB1-222ENST00000543627 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 MEIS2O14770 477 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms