RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 A0A1W2PQJ5 194 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 SLC37A4O43826 429 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ALDH1B1P30837 517 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 TXKP42681 527 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 MKRN3Q13064 507 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 WHAMMP3Q1A5X7 153 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ZNF569Q5MCW4 686 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CREBRFQ8IUR6 639 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 LARP4BQ92615 738 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CUL5Q93034 780 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 TEKT1Q969V4 418 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CCDC17Q96LX7 622 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ERGIC2Q96RQ1 377 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 NAPGQ99747 312 aaPredicted RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 PRDM10Q9NQV6 1147 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 EPN1Q9Y6I3 576 aaPredicted RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 A0A0U1RQJ8 604 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 POTEB2H3BUK9 544 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 RIMBP2O15034 1052 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 TDP2O95551 362 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 PNMA6AP0CW24 399 aaPredicted RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CHMP4BP1P59074 171 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 FKBP1AP62942 108 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CDK17Q00537 523 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 EHHADHQ08426 723 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 SEPT2Q15019 361 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 TSR1Q2NL82 804 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ANKRD40Q6AI12 368 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CDC42EP5Q6NZY7 148 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ADGRF4Q8IZF3 695 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 NLGN1Q8N2Q7 840 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 GUF1Q8N442 669 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ATRIPQ8WXE1 791 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 RAD54LQ92698 747 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 COA7Q96BR5 231 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 MRIQ9BWK5 157 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 PRDM16Q9HAZ2 1276 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 REXO2Q9Y3B8 237 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ARFGEF1Q9Y6D6 1849 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 B4DLN1 442 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ZBTB5O15062 677 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 PPP1R11O60927 126 aaPredicted RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 FGFR1OPO95684 399 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 FCER1AP12319 257 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 MRPL12P52815 198 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 ZBED6P86452 979 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 LRRC63Q05C16 580 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 PSMD2Q13200 908 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 KIF4BQ2VIQ3 1234 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 MIIPQ5JXC2 388 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 HYIQ5T013 277 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 APOBEC3HQ6NTF7 200 aaKnown RBP7.31□□□□□ -1.24
PTPRO-208ENST00000542557 CCDC170Q8IYT3 715 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 SLF1Q9BQI6 1058 aa7.31□□□□□ -1.24
PTPRO-208ENST00000542557 KDM3AQ9Y4C1 1321 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 CCDC151A5D8V7 595 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MYMKA6NI61 221 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 PSMD14O00487 310 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 CYLC1P35663 651 aaPredicted RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 PDE6BP35913 854 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 KRT83P78385 493 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 SETQ01105 290 aaPredicted RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 BRD3Q15059 726 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 CC2D1AQ6P1N0 951 aaPredicted RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 WDR59Q6PJI9 974 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 KRT27Q7Z3Y8 459 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 EHBP1Q8NDI1 1231 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 SNX29Q8TEQ0 813 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 ZDHHC15Q96MV8 337 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 CHP1Q99653 195 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 DHX36Q9H2U1 1008 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 GPCPD1Q9NPB8 672 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MYH7BA7E2Y1 1941 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 F8W031 263 aaPredicted RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 TRIM21P19474 475 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MTIF2P46199 727 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 TNNI2P48788 182 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 EIF6P56537 245 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 AMPD2Q01433 879 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 TBC1D8BQ0IIM8 1120 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 FKBP15Q5T1M5 1219 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 PODNQ7Z5L7 613 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 CLEC10AQ8IUN9 316 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 DCAF4Q8WV16 495 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MKL1Q969V6 931 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 MASTLQ96GX5 879 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 NOC4LQ9BVI4 516 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
PTPRO-208ENST00000542557 DDX25Q9UHL0 483 aaKnown RBP7.3□□□□□ -1.24
PTPRO-208ENST00000542557 POTEMA6NI47 508 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 RASSF10A6NK89 507 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms