RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 HIP1O00291 1037 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 TXNP10599 105 aaKnown RBP23.24■■□□□ 1.31
DDX11-220ENST00000542244 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 PWP2Q15269 919 aaKnown RBP23.24■■□□□ 1.31
DDX11-220ENST00000542244 NBPF20Q3BBV1 942 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 DNERQ8NFT8 737 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 HERVK_113Q902F9 699 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 YBX2Q9Y2T7 364 aaKnown RBP23.24■■□□□ 1.31
DDX11-220ENST00000542244 PRUNE2Q8WUY3 3088 aa23.24■■□□□ 1.31
DDX11-220ENST00000542244 LY6KQ17RY6 165 aa23.23■■□□□ 1.31
DDX11-220ENST00000542244 ASPRV1Q53RT3 343 aa23.23■■□□□ 1.31
DDX11-220ENST00000542244 CCDC62Q6P9F0 684 aa23.23■■□□□ 1.31
DDX11-220ENST00000542244 PSRC1Q6PGN9 363 aaPredicted RBP23.23■■□□□ 1.31
DDX11-220ENST00000542244 RGS22Q8NE09 1264 aa23.23■■□□□ 1.31
DDX11-220ENST00000542244 POLR3EQ9NVU0 708 aa23.23■■□□□ 1.31
DDX11-220ENST00000542244 TMEM265A0A087WTH1 108 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 A6NJR5 290 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 FGBP02675 491 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
DDX11-220ENST00000542244 RABGGTBP53611 331 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 SEPT14Q6ZU15 432 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 SCFD2Q8WU76 684 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 MTG1Q9BT17 334 aaPredicted RBP23.22■■□□□ 1.31
DDX11-220ENST00000542244 PRDM6Q9NQX0 595 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 ABCB11O95342 1321 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 CHD9Q3L8U1 2897 aa23.22■■□□□ 1.31
DDX11-220ENST00000542244 DHX16O60231 1041 aaKnown RBP23.21■■□□□ 1.31
DDX11-220ENST00000542244 MYOGP15173 224 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 CHMLP26374 656 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 CPT1AP50416 773 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 FAM47CQ5HY64 1035 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 STOX1Q6ZVD7 989 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 FBXO11Q86XK2 927 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 AFG1LQ8WV93 481 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 KRT23Q9C075 422 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 NKX2-4Q9H2Z4 354 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 PRDM12Q9H4Q4 367 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 CTNNA3Q9UI47 895 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 MAD2L2Q9UI95 211 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 PNMA2Q9UL42 364 aa23.21■■□□□ 1.31
DDX11-220ENST00000542244 CUL9Q8IWT3 2517 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 SCN10AQ9Y5Y9 1956 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 CYP21A2P08686 494 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 EIF2AK2P19525 551 aaKnown RBP23.2■■□□□ 1.3
DDX11-220ENST00000542244 CHMP4BP1P59074 171 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 ARHGAP1Q07960 439 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 COL9A3Q14050 684 aaPredicted RBP23.2■■□□□ 1.3
DDX11-220ENST00000542244 TTLL4Q14679 1199 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 CCDC178Q5BJE1 867 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 IFIT1BQ5T764 474 aaKnown RBP23.2■■□□□ 1.3
DDX11-220ENST00000542244 ZFP91Q96JP5 570 aaPredicted RBP23.2■■□□□ 1.3
DDX11-220ENST00000542244 CTAGE1Q96RT6 745 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 UBAC1Q9BSL1 405 aa23.2■■□□□ 1.3
DDX11-220ENST00000542244 ADGRE1Q14246 886 aa23.19■■□□□ 1.3
DDX11-220ENST00000542244 CHST3Q7LGC8 479 aa23.19■■□□□ 1.3
DDX11-220ENST00000542244 DEFB128Q7Z7B8 93 aa23.19■■□□□ 1.3
DDX11-220ENST00000542244 RMDN3Q96TC7 470 aa23.19■■□□□ 1.3
DDX11-220ENST00000542244 SCN5AQ14524 2016 aa23.19■■□□□ 1.3
DDX11-220ENST00000542244 GBF1Q92538 1859 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 KLRF2D3W0D1 207 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.3
DDX11-220ENST00000542244 CFBP00751 764 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 KAT2BQ92831 832 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 MTMR8Q96EF0 704 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 CNNM2Q9H8M5 875 aa23.18■■□□□ 1.3
DDX11-220ENST00000542244 GPHNQ9NQX3 736 aaPredicted RBP23.18■■□□□ 1.3
DDX11-220ENST00000542244 VCANP13611 3396 aa23.17■■□□□ 1.3
DDX11-220ENST00000542244 PALM3A6NDB9 673 aaPredicted RBP23.17■■□□□ 1.3
DDX11-220ENST00000542244 SORBS3O60504 671 aa23.17■■□□□ 1.3
DDX11-220ENST00000542244 MMP3P08254 477 aa23.17■■□□□ 1.3
DDX11-220ENST00000542244 IL31RAQ8NI17 732 aa23.17■■□□□ 1.3
DDX11-220ENST00000542244 NSUN6Q8TEA1 469 aaKnown RBP23.17■■□□□ 1.3
DDX11-220ENST00000542244 MRPL11Q9Y3B7 192 aaKnown RBP23.17■■□□□ 1.3
DDX11-220ENST00000542244 CYTH3O43739 400 aa23.16■■□□□ 1.3
DDX11-220ENST00000542244 RGS20O76081 388 aa23.16■■□□□ 1.3
DDX11-220ENST00000542244 HOXA13P31271 388 aaPredicted RBP23.16■■□□□ 1.3
DDX11-220ENST00000542244 ANTXR2P58335 489 aa23.16■■□□□ 1.3
DDX11-220ENST00000542244 SEZ6LQ9BYH1 1024 aa23.16■■□□□ 1.3
DDX11-220ENST00000542244 PXMP2Q9NR77 195 aa23.16■■□□□ 1.3
DDX11-220ENST00000542244 DDX41Q9UJV9 622 aaKnown RBP23.16■■□□□ 1.3
DDX11-220ENST00000542244 NR3C2P08235 984 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 NT5C2P49902 561 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 HSD17B4P51659 736 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 GPNMBQ14956 572 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 ARHGEF16Q5VV41 709 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 PPM1EQ8WY54 764 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 GPKOWQ92917 476 aaPredicted RBP eCLIP23.15■■□□□ 1.3
DDX11-220ENST00000542244 PIGSQ96S52 555 aa23.15■■□□□ 1.3
DDX11-220ENST00000542244 SPTBN5Q9NRC6 3674 aaKnown RBP23.14■■□□□ 1.3
DDX11-220ENST00000542244 ZBBXA8MT70 800 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 E7EWF7 191 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 GH1P01241 217 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 GRM4Q14833 912 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 STXBP2Q15833 593 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 GDF6Q6KF10 455 aaPredicted RBP23.14■■□□□ 1.29
DDX11-220ENST00000542244 NFRKBQ6P4R8 1299 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 HOMER1Q86YM7 354 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 MCF2L2Q86YR7 1114 aa23.14■■□□□ 1.29
DDX11-220ENST00000542244 DHX38Q92620 1227 aaKnown RBP23.14■■□□□ 1.29
DDX11-220ENST00000542244 MPHOSPH6Q99547 160 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms