RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 IKQ13123 557 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-206ENST00000542095 DLGAP5Q15398 846 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 P2RX5Q93086 422 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 ANO3Q9BYT9 981 aa12.13□□□□□ -0.47
NECAP1-206ENST00000542095 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L15C9J2P7 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L13C9JLJ4 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L11C9JVI0 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L18D6R9N7 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L22D6RA61 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L17D6RBQ6 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L19D6RCP7 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L20D6RJB6 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 PSMD14O00487 310 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L24Q0WX57 530 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 MCM6Q14566 821 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 TMEM119Q4V9L6 283 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 USP17L6PQ6QN14 398 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 CPLX3Q8WVH0 158 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 RAD54LQ92698 747 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 HAS1Q92839 578 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
NECAP1-206ENST00000542095 PCDHA12Q9UN75 941 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 RAD17O75943 681 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
NECAP1-206ENST00000542095 MOXD1Q6UVY6 613 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 FAM151AQ8WW52 585 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 GMLQ99445 158 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-206ENST00000542095 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
NECAP1-206ENST00000542095 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-206ENST00000542095 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 CYP3A7-CYP3A51PA0A087WV96 503 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 MYMKA6NI61 221 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 SLC26A4O43511 780 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 GYPCP04921 128 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 CYP3A7P24462 503 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 CASP14P31944 242 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 BAG6P46379 1132 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 JAG1P78504 1218 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 UBXN1Q04323 297 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 STK4Q13043 487 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-206ENST00000542095 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-206ENST00000542095 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 MEIS2O14770 477 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 FCER1AP12319 257 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
NECAP1-206ENST00000542095 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
NECAP1-206ENST00000542095 A0A1W2PQC6 194 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
NECAP1-206ENST00000542095 CCDC175P0C221 793 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 DPEP1P16444 411 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 HYIQ5T013 277 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 TRIM65Q6PJ69 517 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SLFN12Q8IYM2 578 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
NECAP1-206ENST00000542095 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 L2HGDHQ9H9P8 463 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 COL4A5P29400 1685 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 A0A1W2PRG0 241 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SLU7O95391 586 aaKnown RBP12.1□□□□□ -0.47
NECAP1-206ENST00000542095 KCNA3P22001 575 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 FECHP22830 423 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 FXR1P51114 621 aaKnown RBP eCLIP12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SNAP25P60880 206 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 TRAF1Q13077 416 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 USH1GQ495M9 461 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 ANKRD40Q6AI12 368 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 MB21D1Q8N884 522 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
NECAP1-206ENST00000542095 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms