RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CAPNS1P04632 268 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 CYBBP04839 570 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 FAM153BP0C7A2 387 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 LTBRP36941 435 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 YBX1P67809 324 aaKnown RBP4.78□□□□□ -1.64
USP28-210ENST00000542033 SRSF3P84103 164 aaKnown RBP4.78□□□□□ -1.64
USP28-210ENST00000542033 MVKQ03426 396 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 ZNF124Q15973 351 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 YOD1Q5VVQ6 348 aaPredicted RBP4.78□□□□□ -1.64
USP28-210ENST00000542033 BICRALQ6AI39 1079 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 PAQR3Q6TCH7 311 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 ZSWIM2Q8NEG5 633 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 OSBP2Q969R2 916 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 TOX2Q96NM4 488 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 MCOLN1Q9GZU1 580 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 C7orf72A4D263 438 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 ETV2O00321 342 aaPredicted RBP4.77□□□□□ -1.65
USP28-210ENST00000542033 SUMO1P63165 101 aaKnown RBP4.77□□□□□ -1.65
USP28-210ENST00000542033 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 CBX2Q14781 532 aaPredicted RBP4.77□□□□□ -1.65
USP28-210ENST00000542033 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 C2orf27AQ580R0 203 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 SLC35F1Q5T1Q4 408 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 ZC3H14Q6PJT7 736 aaKnown RBP4.77□□□□□ -1.65
USP28-210ENST00000542033 ATG14Q6ZNE5 492 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 LZTR1Q8N653 840 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 KREMEN2Q8NCW0 462 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 USP33Q8TEY7 942 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 DHRS4Q9BTZ2 278 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 BTG4Q9NY30 223 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 GULP1Q9UBP9 304 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 DBR1Q9UK59 544 aaKnown RBP4.77□□□□□ -1.65
USP28-210ENST00000542033 NUDT5Q9UKK9 219 aa4.77□□□□□ -1.65
USP28-210ENST00000542033 MYOCOSA0A1B0GUC4 107 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 DBHP09172 617 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 HMGB1P09429 215 aaKnown RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 MSL3P1P0C860 447 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 C1QTNF9P0C862 333 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 SDHBP21912 280 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 TACR1P25103 407 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 VIPR1P32241 457 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 MAPKAPK2P49137 400 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 GTF2A2P52657 109 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 RPL11P62913 178 aaKnown RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 DLG4P78352 724 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 INF2Q27J81 1249 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 FAM209AQ5JX71 171 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 RPTNQ6XPR3 784 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 TMC6Q7Z403 805 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 NOP9Q86U38 636 aaKnown RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 ZSCAN18Q8TBC5 510 aaPredicted RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 DCAF4Q8WV16 495 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 C1orf159Q96HA4 380 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 KCNK12Q9HB15 430 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
USP28-210ENST00000542033 KLHL14Q9P2G3 628 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 TMEFF2Q9UIK5 374 aaPredicted RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 RWDD3Q9Y3V2 267 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 TIMM13Q9Y5L4 95 aaPredicted RBP4.76□□□□□ -1.65
USP28-210ENST00000542033 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
USP28-210ENST00000542033 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 RFXAPO00287 272 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 FUCA1P04066 466 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 APPP05067 770 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 TESK1Q15569 626 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 KCNA10Q16322 511 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 FOXB2Q5VYV0 432 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 MBLAC2Q68D91 279 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 DENND5AQ6IQ26 1287 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 RSPO2Q6UXX9 243 aaPredicted RBP4.75□□□□□ -1.65
USP28-210ENST00000542033 CCDC103Q8IW40 242 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 NETO2Q8NC67 525 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 RCBTB1Q8NDN9 531 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 SH3TC2Q8TF17 1288 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 EXOC2Q96KP1 924 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 PHF20Q9BVI0 1012 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 GPR27Q9NS67 375 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 MARCH2Q9P0N8 246 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 MBD1Q9UIS9 605 aaPredicted RBP4.75□□□□□ -1.65
USP28-210ENST00000542033 SMG5Q9UPR3 1016 aaKnown RBP4.75□□□□□ -1.65
USP28-210ENST00000542033 MRPS23Q9Y3D9 190 aaKnown RBP4.75□□□□□ -1.65
USP28-210ENST00000542033 PCDHA2Q9Y5H9 948 aa4.75□□□□□ -1.65
USP28-210ENST00000542033 BLACEA4D250 179 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 NPIPB6E9PJ23 425 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 F8W031 263 aaPredicted RBP4.74□□□□□ -1.65
USP28-210ENST00000542033 N4BP3O15049 544 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 GLI4P10075 376 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 PFKLP17858 780 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 BCL6P41182 706 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 LSAMPQ13449 338 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 PLEKHN1Q494U1 663 aaPredicted RBP4.74□□□□□ -1.65
USP28-210ENST00000542033 CIAPIN1Q6FI81 312 aa4.74□□□□□ -1.65
USP28-210ENST00000542033 CEP68Q76N32 757 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms