RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 NDUFAF2Q8N183 169 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PDE11AQ9HCR9 933 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PRR23D1E9PI22 279 aaPredicted RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 PRR23D2P0DMB1 279 aaPredicted RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
HMGA2-210ENST00000541363 RMDN2Q96LZ7 410 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 KLC2Q9H0B6 622 aa16.63■□□□□ 0.25
HMGA2-210ENST00000541363 ANP32DO95626 131 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 GSNP06396 782 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 POLR2FP61218 127 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 GDAP1Q8TB36 358 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 MYL7Q01449 175 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 TJAP1Q5JTD0 557 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 PHF21AQ96BD5 680 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 MYO1FO00160 1098 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 MFAP3P55082 362 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 PLEKHM3Q6ZWE6 761 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 KCTD6Q8NC69 237 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 GCNAQ96QF7 691 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 DDX28Q9NUL7 540 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 ZC3H18Q86VM9 953 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 CRLF3Q8IUI8 442 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 C17orf53Q8N3J3 647 aaPredicted RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 JPH2Q9BR39 696 aaPredicted RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 RRP15Q9Y3B9 282 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 XKR9Q5GH70 373 aa16.62■□□□□ 0.25
HMGA2-210ENST00000541363 DARS2Q6PI48 645 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
HMGA2-210ENST00000541363 TADA3O75528 432 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 EPHB1P54762 984 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 DRP2Q13474 957 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 SGO2Q562F6 1265 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 PPP1R2P3Q6NXS1 205 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
HMGA2-210ENST00000541363 RAPGEF5Q92565 580 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 CYTH2Q99418 400 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 MECOMQ03112 1051 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 TEDDM1Q5T9Z0 273 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 FAM180AQ6UWF9 173 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 ASPSCR1Q9BZE9 553 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 PPP2R2CQ9Y2T4 447 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 MESDQ14696 234 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
HMGA2-210ENST00000541363 C6orf118Q5T5N4 469 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 SERPINB10P48595 397 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 DDB1Q16531 1140 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 FAM160B1Q5W0V3 765 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 MAPK4P31152 587 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 FAM81BQ96LP2 452 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 EFCAB5A4FU69 1503 aa16.61■□□□□ 0.25
HMGA2-210ENST00000541363 ARL4AP40617 200 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 KCNA1Q09470 495 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 IQANK1A0A1B0GTG1 560 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 PLS3P13797 630 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 STAT2P52630 851 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 IMPG1Q17R60 797 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 B4GALNT2Q8NHY0 566 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 GANCQ8TET4 914 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 MED7O43513 233 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 NBNO60934 754 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 DCTN3O75935 186 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 NAA35Q5VZE5 725 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 CCDC90BQ9GZT6 254 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 KRT7P08729 469 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
HMGA2-210ENST00000541363 DYNC1I2Q13409 638 aaKnown RBP16.6■□□□□ 0.25
HMGA2-210ENST00000541363 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 TTC30BQ8N4P2 665 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-210ENST00000541363 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 SEPT2Q15019 361 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 TRIM33Q9UPN9 1127 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 H7C1D1 291 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ORC4O43929 436 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms