RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ABCC6O95255 1503 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 OVOS2A0A0J9YW53 1432 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 OVOS2Q6IE36 1432 aa7.76□□□□□ -1.17
SUDS3-202ENST00000541280 RTL1A6NKG5 1358 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 RGPD8O14715 1765 aaPredicted RBP7.75□□□□□ -1.17
SUDS3-202ENST00000541280 TSPAN15O95858 294 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 RNF4P78317 190 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 NR0B2Q15466 257 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 MPZL3Q6UWV2 235 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 MYLIPQ8WY64 445 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 CAMKK2Q96RR4 588 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.75□□□□□ -1.17
SUDS3-202ENST00000541280 KNSTRNQ9Y448 316 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 DISP2A7MBM2 1401 aa7.75□□□□□ -1.17
SUDS3-202ENST00000541280 SHISA3A0PJX4 238 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 GBP1P32455 592 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 HK2P52789 917 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 ERVFC1P60507 584 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 RRS1Q15050 365 aaKnown RBP7.74□□□□□ -1.17
SUDS3-202ENST00000541280 ARSHQ5FYA8 562 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 LILRA2Q8N149 483 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 MARCH10Q8NA82 808 aaPredicted RBP7.74□□□□□ -1.17
SUDS3-202ENST00000541280 RAPGEF4Q8WZA2 1011 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
SUDS3-202ENST00000541280 LTV1Q96GA3 475 aaPredicted RBP7.74□□□□□ -1.17
SUDS3-202ENST00000541280 NT5C1AQ9BXI3 368 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 OVOS2A0A0G2JMS6 1433 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 NRKQ7Z2Y5 1582 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 WASHC2AQ641Q2 1341 aa7.74□□□□□ -1.17
SUDS3-202ENST00000541280 INSRP06213 1382 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
SUDS3-202ENST00000541280 MEIS3P2A8K0S8 358 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 RAG1P15918 1043 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 ZNF16P17020 682 aaPredicted RBP7.73□□□□□ -1.17
SUDS3-202ENST00000541280 CCNFP41002 786 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 TEKQ02763 1124 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 SLITRK4Q8IW52 837 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 FBXO15Q8NCQ5 510 aaPredicted RBP7.73□□□□□ -1.17
SUDS3-202ENST00000541280 ZCRB1Q8TBF4 217 aaKnown RBP7.73□□□□□ -1.17
SUDS3-202ENST00000541280 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
SUDS3-202ENST00000541280 HDAC8Q9BY41 377 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 NFAT5O94916 1531 aa7.73□□□□□ -1.17
SUDS3-202ENST00000541280 NSD2O96028 1365 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 FLT4P35916 1363 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 NSD3Q9BZ95 1437 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 EZH2Q15910 746 aaKnown RBP7.72□□□□□ -1.17
SUDS3-202ENST00000541280 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 NBPF12Q5TAG4 269 aaPredicted RBP7.72□□□□□ -1.17
SUDS3-202ENST00000541280 OXR1Q8N573 874 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 UBP1Q9NZI7 540 aa7.72□□□□□ -1.17
SUDS3-202ENST00000541280 MARF1Q9Y4F3 1742 aaKnown RBP7.72□□□□□ -1.17
SUDS3-202ENST00000541280 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
SUDS3-202ENST00000541280 KRT1P04264 644 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 FBLN1P23142 703 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 CLCQ05315 142 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 NMIQ13287 307 aaPredicted RBP7.71□□□□□ -1.18
SUDS3-202ENST00000541280 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 MORC1Q86VD1 984 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 DAGLBQ8NCG7 672 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 NBPF4Q96M43 638 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 NSUN3Q9H649 340 aaKnown RBP7.71□□□□□ -1.18
SUDS3-202ENST00000541280 POLKQ9UBT6 870 aa7.71□□□□□ -1.18
SUDS3-202ENST00000541280 LMO7Q8WWI1 1683 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 TNFRSF10CO14798 259 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 ZNF165P49910 485 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 DUSP4Q13115 394 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
SUDS3-202ENST00000541280 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 RNF111Q6ZNA4 994 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 SYDE1Q6ZW31 735 aaPredicted RBP7.7□□□□□ -1.18
SUDS3-202ENST00000541280 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 LINC01599Q8WXQ3 324 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 G6PC3Q9BUM1 346 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 RNF32Q9H0A6 362 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 ASCC2Q9H1I8 757 aaPredicted RBP7.7□□□□□ -1.18
SUDS3-202ENST00000541280 EPB41L4BQ9H329 900 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 PHRF1Q9P1Y6 1649 aaKnown RBP7.7□□□□□ -1.18
SUDS3-202ENST00000541280 PIK3C2AO00443 1686 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 PLCH1Q4KWH8 1693 aa7.7□□□□□ -1.18
SUDS3-202ENST00000541280 NRAPQ86VF7 1730 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 ABCA3Q99758 1704 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 RAP1GAPP47736 663 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 CHMP4BP1P59074 171 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 CHRNEQ04844 493 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 CLEC16AQ2KHT3 1053 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 TMCO4Q5TGY1 634 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 IRF2BP1Q8IU81 584 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 ZNF655Q8N720 491 aaPredicted RBP7.69□□□□□ -1.18
SUDS3-202ENST00000541280 ANKS4BQ8N8V4 417 aa7.69□□□□□ -1.18
SUDS3-202ENST00000541280 SYTL4Q96C24 671 aaPredicted RBP7.69□□□□□ -1.18
SUDS3-202ENST00000541280 EAF1Q96JC9 268 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms