RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ZNF70Q9UC06 446 aaPredicted RBP15.67■□□□□ 0.1
COLCA1-204ENST00000540738 ABL1P00519 1130 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 CETPP11597 493 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 PPP2R3AQ06190 1150 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 C9orf131Q5VYM1 1079 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 FAM151AQ8WW52 585 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 NDC80O14777 642 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 ERCC5P28715 1186 aaPredicted RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 KLHL30Q0D2K2 578 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 SURF1Q15526 300 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 KCNV1Q6PIU1 500 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 SRRTQ9BXP5 876 aaKnown RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 PODXL2Q9NZ53 605 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 F5H6K3 240 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 PFKFB1P16118 471 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 POLR2BP30876 1174 aaKnown RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 KLRC3Q07444 240 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 CYP26C1Q6V0L0 522 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 CEP112Q8N8E3 955 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 SERPINA10Q9UK55 444 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 UQCRHLA0A096LP55 91 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 UQCRHP07919 91 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 CYP2D6P10635 497 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 KIF11P52732 1056 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 RCAN1P53805 252 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 CCDC122Q5T0U0 273 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 GBP6Q6ZN66 633 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 STMN4Q9H169 189 aaPredicted RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 DLATP10515 647 aaKnown RBP15.66■□□□□ 0.1
COLCA1-204ENST00000540738 ALCAMQ13740 583 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 SFMBT2Q5VUG0 894 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 ANKRD13AQ8IZ07 590 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 ATP8B3O60423 1300 aa15.66■□□□□ 0.1
COLCA1-204ENST00000540738 A0A1W2PRG0 241 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 CELF2O95319 508 aaKnown RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 GYS1P13807 737 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 STAT1P42224 750 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 FAM81BQ96LP2 452 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 GINM1Q9NU53 330 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 BAG1Q99933 345 aaPredicted RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 ZMYND15Q9H091 742 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 OSBPL5Q9H0X9 879 aaPredicted RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 TYW5A2RUC4 315 aaKnown RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 HMGCS2P54868 508 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 COG2Q14746 738 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 CLUL1Q15846 466 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 TKFCQ3LXA3 575 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 FAM196BA6NMK8 535 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
COLCA1-204ENST00000540738 KRT76Q01546 638 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 ARHGAP44Q17R89 818 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 C7orf31Q8N865 590 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 PI4K2BQ8TCG2 481 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 USP28Q96RU2 1077 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
COLCA1-204ENST00000540738 CSF1RP07333 972 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 BPIFB4P59827 614 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 LACTBP83111 547 aaPredicted RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 HDLBPQ00341 1268 aaKnown RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 MTMR1Q13613 665 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 NEDD1Q8NHV4 660 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 USP32Q8NFA0 1604 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 RASGRP4Q8TDF6 673 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 RPAP3Q9H6T3 665 aaPredicted RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 WDR46O15213 610 aaKnown RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 ELF1P32519 619 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 ZNF280CQ8ND82 737 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 CCDC127Q96BQ5 260 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 MMP1P03956 469 aa15.64■□□□□ 0.09
COLCA1-204ENST00000540738 PDZD4Q76G19 769 aaPredicted RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 ADARB2Q9NS39 739 aaKnown RBP15.64■□□□□ 0.09
COLCA1-204ENST00000540738 MYL1P05976 194 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 ADAM9Q13443 819 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 CATSPER4Q7RTX7 472 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
COLCA1-204ENST00000540738 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
COLCA1-204ENST00000540738 WDR19Q8NEZ3 1342 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 VEGFAP15692 232 aaPredicted RBP15.63■□□□□ 0.09
COLCA1-204ENST00000540738 FANCCQ00597 558 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 UBE2SQ16763 222 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 FAM49AQ9H0Q0 323 aaPredicted RBP15.63■□□□□ 0.09
COLCA1-204ENST00000540738 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms