RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
C2CD3-215ENST00000540452 NOC3LQ8WTT2 800 aaKnown RBP9.34□□□□□ -0.91
C2CD3-215ENST00000540452 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
C2CD3-215ENST00000540452 RWDD2AQ9UIY3 292 aa9.34□□□□□ -0.91
C2CD3-215ENST00000540452 PCDHA12Q9UN75 941 aa9.34□□□□□ -0.91
C2CD3-215ENST00000540452 FRMPD4Q14CM0 1322 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 SCN4AP35499 1836 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 LRRC10BA6NIK2 292 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 UNCXA6NJT0 531 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 GCOM1H8Y6P7 765 aaPredicted RBP9.33□□□□□ -0.92
C2CD3-215ENST00000540452 BIN1O00499 593 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 ATP2A1O14983 1001 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 EDIL3O43854 480 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 PRR29P0C7W0 189 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 POLR2MP0CAP2 368 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 ECE1P42892 770 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 HSD17B4P51659 736 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 RASSF7Q02833 373 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 FAM83BQ5T0W9 1011 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 XRRA1Q6P2D8 792 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 SV2BQ7L1I2 683 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 KRT26Q7Z3Y9 468 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
C2CD3-215ENST00000540452 CCDC112Q8NEF3 446 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 RASSF8Q8NHQ8 419 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 ETNPPLQ8TBG4 499 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 ACER1Q8TDN7 264 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 LARP4BQ92615 738 aaKnown RBP9.33□□□□□ -0.92
C2CD3-215ENST00000540452 DHTKD1Q96HY7 919 aaPredicted RBP9.33□□□□□ -0.92
C2CD3-215ENST00000540452 CDK5RAP3Q96JB5 506 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 FEZ1Q99689 392 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 SLF1Q9BQI6 1058 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 HSD3B7Q9H2F3 369 aa9.33□□□□□ -0.92
C2CD3-215ENST00000540452 TTC12Q9H892 705 aaPredicted RBP9.33□□□□□ -0.92
C2CD3-215ENST00000540452 ZNF541Q9H0D2 1346 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 SYNRGQ9UMZ2 1314 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 BICDL2A1A5D9 508 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PSMA7O14818 248 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 OPLAHO14841 1288 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 FOXN1O15353 648 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 SLC37A4O43826 429 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 KIF20AO95235 890 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 TDP2O95551 362 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PLCG1P19174 1290 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 DSG3P32926 999 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 TERF1P54274 439 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 FANCCQ00597 558 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PAK1Q13153 545 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 UBE2SQ16763 222 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 TKFCQ3LXA3 575 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 SH3D19Q5HYK7 790 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 CDKAL1Q5VV42 579 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 ANKRD20A12PQ8NF67 263 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 NEK9Q8TD19 979 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 HAS1Q92839 578 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 IQCDQ96DY2 449 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 MTRQ99707 1265 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 MMTAG2Q9BU76 263 aaKnown RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 WDR11Q9BZH6 1224 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 SLC38A10Q9HBR0 1119 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 ADARB2Q9NS39 739 aaKnown RBP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 TMEM260Q9NX78 707 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PPP1R9AQ9ULJ8 1098 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 NFE2L3Q9Y4A8 694 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.32□□□□□ -0.92
C2CD3-215ENST00000540452 RLFQ13129 1914 aa9.32□□□□□ -0.92
C2CD3-215ENST00000540452 PTPRFP10586 1907 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 KLRC4O43908 158 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 MARCH6O60337 910 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 TUBB4AP04350 444 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 PTPRAP18433 802 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 RPA1P27694 616 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 TECP42680 631 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 TXKP42681 527 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 AFMP43652 599 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 BACE1P56817 501 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 UBASH3AP57075 661 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 GRB10Q13322 594 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 TBC1D10BQ4KMP7 808 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 COL13A1Q5TAT6 717 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 UNC13DQ70J99 1090 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 LDHDQ86WU2 507 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 DRC7Q8IY82 874 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 ADSSL1Q8N142 457 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 KIAA1524Q8TCG1 905 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 SNX29Q8TEQ0 813 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 RAD54LQ92698 747 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms