RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BTDP43251 543 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 CPLX4Q7Z7G2 160 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 KAT2BQ92831 832 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 KIF4AO95239 1232 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 IDEP14735 1019 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 CCT6AP40227 531 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 PPARDQ03181 441 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 KANK3Q6NY19 840 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 DLK2Q6UY11 383 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SPDL1Q96EA4 605 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 PNMA3Q9UL41 463 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SUGT1Q9Y2Z0 365 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 TAF1LQ8IZX4 1826 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 KRT9P35527 623 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 KRT83P78385 493 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 MLLT1Q03111 559 aaPredicted RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 RBL2Q08999 1139 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 TC2NQ8N9U0 490 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 PHKBQ93100 1093 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 KIFC2Q96AC6 838 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 ZHX2Q9Y6X8 837 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 USO1O60763 962 aaKnown RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 OSBPP22059 807 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 PHKA1P46020 1223 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 USP14P54578 494 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDB1-217ENST00000540166 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 IFT81Q8WYA0 676 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 CCDC51Q96ER9 411 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 CLIC6Q96NY7 704 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 TMEM39BQ9GZU3 492 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 ZBTB43O43298 467 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 CASP14P31944 242 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 CYLC1P35663 651 aaPredicted RBP9.62□□□□□ -0.87
DDB1-217ENST00000540166 UBXN2AP68543 259 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 COA7Q96BR5 231 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 NACAP1Q9BZK3 213 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 WBP1LQ9NX94 342 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 SLC12A7Q9Y666 1083 aa9.62□□□□□ -0.87
DDB1-217ENST00000540166 CTDNEP1O95476 244 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ZFYP08048 801 aaPredicted RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 SSRP1Q08945 709 aaKnown RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 NCAPHQ15003 741 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 DYDC1Q8WWB3 177 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 JAKMIP2Q96AA8 810 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 OPTNQ96CV9 577 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ZNF287Q9HBT7 754 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 IRAK4Q9NWZ3 460 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 FAM184BQ9ULE4 1060 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 FGAP02671 866 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 SLC9C1Q4G0N8 1177 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 KRT40Q6A162 431 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 FASTKD5Q7L8L6 764 aaKnown RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 ERO1BQ86YB8 467 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ZKSCAN4Q969J2 545 aaPredicted RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 ABHD8Q96I13 439 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 AATFQ9NY61 560 aaKnown RBP eCLIP9.61□□□□□ -0.87
DDB1-217ENST00000540166 ASTN2O75129 1339 aaPredicted RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 CIAO1O76071 339 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 AFMP43652 599 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 DNA2P51530 1060 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 ZNF280AP59817 542 aaPredicted RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 KIF5AQ12840 1032 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 PLS1Q14651 629 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 POSTNQ15063 836 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 PPP1R7Q15435 360 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 SLC9C2Q5TAH2 1124 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
DDB1-217ENST00000540166 PRPF38AQ8NAV1 312 aaKnown RBP9.61□□□□□ -0.87
DDB1-217ENST00000540166 SP3Q02447 781 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 ZYXQ15942 572 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 WDR93Q6P2C0 686 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 MIGA1Q8NAN2 632 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 MYL10Q9BUA6 226 aa9.6□□□□□ -0.87
DDB1-217ENST00000540166 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
DDB1-217ENST00000540166 VPS16Q9H269 839 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms