RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PPP1R9AQ9ULJ8 1098 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 FOCADQ5VW36 1801 aa7.52□□□□□ -1.21
SNHG1-212ENST00000539975 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-212ENST00000539975 KLRF2D3W0D1 207 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 SH2B2O14492 632 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 TNPO2O14787 897 aaKnown RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 CPLX1O14810 134 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 FOXN1O15353 648 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ST8SIA5O15466 376 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 CAPN5O15484 640 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ZBTB43O43298 467 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 PLA2G6O60733 806 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 SLC25A27O95847 323 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 PDHBP11177 359 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 STAT3P40763 770 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 NOVP48745 357 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 NEK4P51957 841 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 AKAP17AQ02040 695 aaKnown RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ZNF543Q08ER8 600 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 NR1H3Q13133 447 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 MOGSQ13724 837 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 SEC23AQ15436 765 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ADCK5Q3MIX3 580 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 C17orf99Q6UX52 265 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 Q6ZUG5 572 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 NCAPG2Q86XI2 1143 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ZNF654Q8IZM8 581 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 CPXCR1Q8N123 301 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 ZNF296Q8WUU4 475 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 BRF1Q92994 677 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 KCTD15Q96SI1 283 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 MAP3K14Q99558 947 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 TEX13BQ9BXU2 312 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 LRRC2Q9BYS8 371 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 MROH8Q9H579 483 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 VAT1LQ9HCJ6 419 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 RBM28Q9NW13 759 aaKnown RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 SEC63Q9UGP8 760 aaKnown RBP7.51□□□□□ -1.21
SNHG1-212ENST00000539975 TACC3Q9Y6A5 838 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 TAF6LQ9Y6J9 622 aa7.51□□□□□ -1.21
SNHG1-212ENST00000539975 DDX60LQ5H9U9 1706 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 DOCK1Q14185 1865 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 KLF18A0A0U1RQI7 1052 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 VWA5AO00534 786 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 STRNO43815 780 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 GOLGA8HP0CJ92 632 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 SLC16A2P36021 539 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 PSMC4P43686 418 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 METAP2P50579 478 aaKnown RBP eCLIP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 OAZ1P54368 228 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 PRMT2P55345 433 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 ANTXR2P58335 489 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 ERVK-24P63145 666 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 LACTBP83111 547 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 MCM6Q14566 821 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 KCTD2Q14681 263 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 PKN2Q16513 984 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 SYDE2Q5VT97 1194 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 SNRNP48Q6IEG0 339 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 LBX2Q6XYB7 198 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 MICU3Q86XE3 530 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 FANCBQ8NB91 859 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 ATG4CQ96DT6 458 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 RRP36Q96EU6 259 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 KLF16Q9BXK1 252 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 UPF3BQ9BZI7 483 aaKnown RBP7.5□□□□□ -1.21
SNHG1-212ENST00000539975 LY9Q9HBG7 655 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 PRDM10Q9NQV6 1147 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 FBXO28Q9NVF7 368 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 MORF4L1Q9UBU8 362 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
SNHG1-212ENST00000539975 BAZ2AQ9UIF9 1905 aaKnown RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 GOLGA8AA7E2F4 631 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 GOLGA8BA8MQT2 603 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 GPR37L1O60883 481 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CDKL5O76039 1030 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 HSPA8P11142 646 aaKnown RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 BCRP11274 1271 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 FCER1AP12319 257 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 TIMP2P16035 220 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 FSHRP23945 695 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SMARCA1P28370 1054 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 RCAN1P53805 252 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 WDR4P57081 412 aaKnown RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 GRM4Q14833 912 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 RABEP1Q15276 862 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 RTN1Q16799 776 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 KIAA1755Q5JYT7 1200 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CCDC174Q6PII3 467 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 APOA5Q6Q788 366 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 BTNL9Q6UXG8 535 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms