RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TMEM139Q8IV31 216 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 MLKLQ8NB16 471 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 FAM174AQ8TBP5 190 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 ENOX1Q8TC92 643 aaKnown RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 TBC1D22AQ8WUA7 517 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CCDC51Q96ER9 411 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 OCSTAMPQ9BR26 566 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 PARD6BQ9BYG5 372 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 FAM107BQ9H098 131 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 HSD3B7Q9H2F3 369 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 ACBD3Q9H3P7 528 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 MYO1AQ9UBC5 1043 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF70Q9UC06 446 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 ADAM21Q9UKJ8 722 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CSADQ9Y600 493 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 TAF6LQ9Y6J9 622 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CCL15-CCL14A0A0B4J2E2 113 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 ERICH4A6NGS2 130 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 E7EWF7 191 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 TLR2O60603 784 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 ZFYP08048 801 aaPredicted RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 EN2P19622 333 aaPredicted RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 MCM3P25205 808 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 RBM5P52756 815 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 KCNH2Q12809 1159 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 PTK7Q13308 1070 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 KIF22Q14807 665 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 CCL15Q16663 113 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 LDHAL6AQ6ZMR3 332 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 KRBA2Q6ZNG9 492 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 FAM83AQ86UY5 434 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 ERO1BQ86YB8 467 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 ERCC4Q92889 916 aaPredicted RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 C8orf76Q96K31 380 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 TCEANC2Q96MN5 208 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 MED4Q9NPJ6 270 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 DBNLQ9UJU6 430 aaKnown RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
CCDC60-204ENST00000539847 FZD1Q9UP38 647 aa8.64□□□□□ -1.03
CCDC60-204ENST00000539847 A6NNZ2 444 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 F8W031 263 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 MYO1CO00159 1063 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 TLL1O43897 1013 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SASH3O75995 380 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 CDKL5O76039 1030 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SERPINC1P01008 464 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 PFKFB1P16118 471 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 ZNF16P17020 682 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 ZNF18P17022 549 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 ERCC5P28715 1186 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 HIBADHP31937 336 aaKnown RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 MAGEA9P43362 315 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SYKP43405 635 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 TNNT3P45378 269 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 NOP2P46087 812 aaKnown RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 MMP16P51512 607 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 GNG11P61952 73 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 LACTBP83111 547 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 CEBPZQ03701 1054 aaKnown RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 APOBRQ0VD83 1088 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SNAPC2Q13487 334 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 COL9A3Q14050 684 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 VGLL4Q14135 290 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 TUBB8Q3ZCM7 444 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 BEND6Q5SZJ8 279 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-204ENST00000539847 RESP18Q5W5W9 173 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SPECC1LQ69YQ0 1117 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 LMBR1LQ6UX01 489 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 LEKR1Q6ZMV7 388 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 STOX1Q6ZVD7 989 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 SRLQ86TD4 932 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 L1RE1Q9UN81 338 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
CCDC60-204ENST00000539847 MAST3O60307 1309 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 MROH5Q6ZUA9 1318 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 SNAP23O00161 211 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 POLR3GO15318 223 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 RNF113AO15541 343 aaKnown RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CPP00450 1065 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 HSPD1P10809 573 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms