RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
PBX3-212ENST00000538998 GDPD5Q8WTR4 605 aa16.67■□□□□ 0.26
PBX3-212ENST00000538998 PNMA2Q9UL42 364 aa16.67■□□□□ 0.26
PBX3-212ENST00000538998 LCHNA4D1U4 455 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 B4DLN1 442 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 NMT2O60551 498 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 PARNO95453 639 aaKnown RBP16.66■□□□□ 0.26
PBX3-212ENST00000538998 CALML3P27482 149 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 MRPL12P52815 198 aaKnown RBP16.66■□□□□ 0.26
PBX3-212ENST00000538998 PTGISQ16647 500 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 SYDE2Q5VT97 1194 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 DNERQ8NFT8 737 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
PBX3-212ENST00000538998 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
PBX3-212ENST00000538998 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 TXNP10599 105 aaKnown RBP16.65■□□□□ 0.26
PBX3-212ENST00000538998 SELPP16109 830 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 EDNRBP24530 442 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 SLC16A2P36021 539 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 NOVP48745 357 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 CNKSR3Q6P9H4 555 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 SEC62Q99442 399 aaKnown RBP16.65■□□□□ 0.26
PBX3-212ENST00000538998 RAD9AQ99638 391 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
PBX3-212ENST00000538998 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 LEXMQ3ZCV2 418 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 LRRC8DQ7L1W4 858 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 COPS5Q92905 334 aa16.64■□□□□ 0.25
PBX3-212ENST00000538998 TGS1Q96RS0 853 aaKnown RBP16.64■□□□□ 0.25
PBX3-212ENST00000538998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
PBX3-212ENST00000538998 ABHD14A-ACY1A0A1B0GW23 586 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
PBX3-212ENST00000538998 EFCAB14O75071 495 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 GJB5O95377 273 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 CXCL10P02778 98 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 ERVK-21P61565 698 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
PBX3-212ENST00000538998 DEFB103AP81534 67 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 RBL2Q08999 1139 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 ZMYM1Q5SVZ6 1142 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
PBX3-212ENST00000538998 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 GJD3Q8N144 294 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 SUGCTQ9HAC7 445 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
PBX3-212ENST00000538998 ORC4O43929 436 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 GPNMBQ14956 572 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 ALYREFQ86V81 257 aaKnown RBP16.62■□□□□ 0.25
PBX3-212ENST00000538998 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
PBX3-212ENST00000538998 LINC01553A4QN01 128 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 MMP3P08254 477 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
PBX3-212ENST00000538998 ALADP13716 330 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 KCNA5P22460 613 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
PBX3-212ENST00000538998 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
PBX3-212ENST00000538998 DHX38Q92620 1227 aaKnown RBP16.61■□□□□ 0.25
PBX3-212ENST00000538998 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
PBX3-212ENST00000538998 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
PBX3-212ENST00000538998 PIEZO1Q92508 2521 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 FOXP2O15409 715 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 NBNO60934 754 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 ARIH2O95376 493 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 GH1P01241 217 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 CKBP12277 381 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 IKBKEQ14164 716 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 PUS10Q3MIT2 529 aaKnown RBP16.6■□□□□ 0.25
PBX3-212ENST00000538998 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.6■□□□□ 0.25
PBX3-212ENST00000538998 AFG1LQ8WV93 481 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 PTPRSQ13332 1948 aa16.6■□□□□ 0.25
PBX3-212ENST00000538998 FGRP09769 529 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
PBX3-212ENST00000538998 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
PBX3-212ENST00000538998 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 RGS22Q8NE09 1264 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 FBXO22Q8NEZ5 403 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 TET1Q8NFU7 2136 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 KAT2BQ92831 832 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 MAF1Q9H063 256 aa16.59■□□□□ 0.25
PBX3-212ENST00000538998 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.25
PBX3-212ENST00000538998 PDHBP11177 359 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 ARHGAP1Q07960 439 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms