RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 OS9Q13438 667 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 EPHA10Q5JZY3 1008 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 AGMOQ6ZNB7 445 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 ANKRD44Q8N8A2 993 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 GPBAR1Q8TDU6 330 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 UTP4Q969X6 686 aaKnown RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 KAZALD1Q96I82 304 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 FAM46AQ96IP4 442 aaKnown RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 RSRP1Q9BUV0 290 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 WDR18Q9BV38 432 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 CNNM1Q9NRU3 951 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 ZBTB40Q9NUA8 1239 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 KIAA1522Q9P206 1035 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 GGT7Q9UJ14 662 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 TLR6Q9Y2C9 796 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 SYNGAP1Q96PV0 1343 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 GAS2O43903 313 aaKnown RBP5.29□□□□□ -1.56
SNHG1-208ENST00000538266 TIAF1O95411 115 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 ADH5P11766 374 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 KCNA3P22001 575 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 GBP2P32456 591 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-208ENST00000538266 KCNJ4P48050 445 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 PREPP48147 710 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 MTX1Q13505 466 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 PWP1Q13610 501 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 KIF4BQ2VIQ3 1234 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 CCDC93Q567U6 631 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 SCARA3Q6AZY7 606 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 CEP85Q6P2H3 762 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 LDHAL6AQ6ZMR3 332 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 HS2ST1Q7LGA3 356 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 RPAP2Q8IXW5 612 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-208ENST00000538266 RTKN2Q8IZC4 609 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 ARMC10Q8N2F6 343 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 CELF1Q92879 486 aaKnown RBP5.29□□□□□ -1.56
SNHG1-208ENST00000538266 SIL1Q9H173 461 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 BSDC1Q9NW68 430 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-208ENST00000538266 PPP1R9AQ9ULJ8 1098 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 PCDHA4Q9UN74 947 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 ATP6V0A2Q9Y487 856 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 PCDHB5Q9Y5E4 795 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 SLX4Q8IY92 1834 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 ARFGEF1Q9Y6D6 1849 aa5.29□□□□□ -1.56
SNHG1-208ENST00000538266 LRRC37AA6NMS7 1700 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 TAF1P21675 1872 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 XDHP47989 1333 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 PNMA6EA0A0J9YXQ4 647 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 DHX15O43143 795 aaKnown RBP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 GRIN3BO60391 1043 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 CIAO1O76071 339 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 BMP3P12645 472 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 YBX3P16989 372 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 TFE3P19532 575 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 ZNF76P36508 570 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 ASPAP45381 313 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 ATP8B2P98198 1209 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 PTPN11Q06124 597 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 G3BP1Q13283 466 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 UVSSAQ2YD98 709 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 HSP90AB4PQ58FF6 505 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 METTL24Q5JXM2 366 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 DPP8Q6V1X1 898 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 ARHGAP27Q6ZUM4 889 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 SP8Q8IXZ3 490 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 C2CD4AQ8NCU7 369 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-208ENST00000538266 SUPT20HQ8NEM7 779 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 EXOC6Q8TAG9 804 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 TMEM74Q96NL1 305 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 ANKRD2Q9GZV1 360 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 MIR1-1HGQ9H1L0 117 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 TAOK3Q9H2K8 898 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 COPRSQ9NQ92 184 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 CACNA2D2Q9NY47 1150 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 STOML1Q9UBI4 398 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 AP4E1Q9UPM8 1137 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 CSADQ9Y600 493 aa5.28□□□□□ -1.56
SNHG1-208ENST00000538266 MROH5Q6ZUA9 1318 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 DCDC2CA8MYV0 355 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 EYA2O00167 538 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 SCAMP3O14828 347 aaKnown RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 SURF6O75683 361 aaKnown RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 UFL1O94874 794 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 RECKO95980 971 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 PF4P02776 101 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 FURINP09958 794 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 IL15P40933 162 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 ID3Q02535 119 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 CHRNDQ07001 517 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 CAMK2GQ13555 558 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 ZC3H12AQ5D1E8 599 aaKnown RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 CDPF1Q6NVV7 123 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 OLFM4Q6UX06 510 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 C12orf40Q86WS4 652 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 ERC1Q8IUD2 1116 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 PHC3Q8NDX5 983 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 KLHDC4Q8TBB5 520 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 SSH3Q8TE77 659 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 RNF34Q969K3 372 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms