RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 NETO2Q8NC67 525 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 DDX1Q92499 740 aaKnown RBP8.82□□□□□ -1
CCDC7-208ENST00000537047 DPF3Q92784 378 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 DDX11Q96FC9 970 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 PEX11GQ96HA9 241 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 SPATA32Q96LK8 384 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 SPATA6Q9NWH7 488 aaPredicted RBP8.82□□□□□ -1
CCDC7-208ENST00000537047 CASP7P55210 303 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 SCRN1Q12765 414 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 SMAD4Q13485 552 aaKnown RBP8.81□□□□□ -1
CCDC7-208ENST00000537047 ZFYVE27Q5T4F4 411 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 CARFQ8N187 725 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 ACBD3Q9H3P7 528 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 USP40Q9NVE5 1235 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 EMC9Q9Y3B6 208 aa8.81□□□□□ -1
CCDC7-208ENST00000537047 ANKRD34BA5PLL1 514 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 CACNB2Q08289 660 aaPredicted RBP8.8□□□□□ -1
CCDC7-208ENST00000537047 CYP4F3Q08477 520 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 INF2Q27J81 1249 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 PLEKHO2Q8TD55 490 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 COPS5Q92905 334 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
CCDC7-208ENST00000537047 MARCH2Q9P0N8 246 aa8.8□□□□□ -1
CCDC7-208ENST00000537047 NOBOXO60393 691 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 NPHS1O60500 1241 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 C8BP07358 591 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 SPATS1Q496A3 300 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 UBXN11Q5T124 520 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 ZBTB8AQ96BR9 441 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 BTG4Q9NY30 223 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC7-208ENST00000537047 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
CCDC7-208ENST00000537047 NUDT5Q9UKK9 219 aa8.79□□□□□ -1
CCDC7-208ENST00000537047 THBDP07204 575 aa8.78□□□□□ -1
CCDC7-208ENST00000537047 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
CCDC7-208ENST00000537047 FAM26EQ8N5C1 309 aa8.78□□□□□ -1
CCDC7-208ENST00000537047 CPA5Q8WXQ8 436 aa8.78□□□□□ -1
CCDC7-208ENST00000537047 TBX1O43435 398 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 CNR2P34972 360 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 SLC9A5Q14940 896 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 GTF2IRD2BQ6EKJ0 949 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 GTF2IRD2Q86UP8 949 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 STK32CQ86UX6 486 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 BVESQ8NE79 360 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 GORASP1Q9BQQ3 440 aa8.77□□□□□ -1.01
CCDC7-208ENST00000537047 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
CCDC7-208ENST00000537047 ARNTLO00327 626 aa8.76□□□□□ -1.01
CCDC7-208ENST00000537047 SGSM2O43147 1006 aa8.76□□□□□ -1.01
CCDC7-208ENST00000537047 ZNF761Q86XN6 746 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-208ENST00000537047 PPP1R14AQ96A00 147 aa8.76□□□□□ -1.01
CCDC7-208ENST00000537047 APBA2Q99767 749 aa8.76□□□□□ -1.01
CCDC7-208ENST00000537047 SARSP49591 514 aaKnown RBP8.75□□□□□ -1.01
CCDC7-208ENST00000537047 HHIPL2Q6UWX4 724 aa8.75□□□□□ -1.01
CCDC7-208ENST00000537047 FRS2Q8WU20 508 aa8.75□□□□□ -1.01
CCDC7-208ENST00000537047 MRGPRX3Q96LB0 322 aa8.75□□□□□ -1.01
CCDC7-208ENST00000537047 MMP19Q99542 508 aa8.75□□□□□ -1.01
CCDC7-208ENST00000537047 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
CCDC7-208ENST00000537047 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
CCDC7-208ENST00000537047 TRBV23OR9-2A0A075B6M9 112 aa8.74□□□□□ -1.01
CCDC7-208ENST00000537047 ZBTB7AO95365 584 aa8.74□□□□□ -1.01
CCDC7-208ENST00000537047 FPR2P25090 351 aa8.74□□□□□ -1.01
CCDC7-208ENST00000537047 ZXDCQ2QGD7 858 aaPredicted RBP8.74□□□□□ -1.01
CCDC7-208ENST00000537047 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
CCDC7-208ENST00000537047 SEC16BQ96JE7 1060 aa8.74□□□□□ -1.01
CCDC7-208ENST00000537047 C22orf46C9J442 243 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 GJA9P57773 515 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 LINC00482Q8N8I6 264 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 BTN2A2Q8WVV5 523 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 NTMQ9P121 344 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 MRVI1Q9Y6F6 885 aa8.73□□□□□ -1.01
CCDC7-208ENST00000537047 B2RBV5 119 aa8.72□□□□□ -1.01
CCDC7-208ENST00000537047 CYP2C8P10632 490 aa8.72□□□□□ -1.01
CCDC7-208ENST00000537047 ADAMTS17Q8TE56 1095 aa8.72□□□□□ -1.01
CCDC7-208ENST00000537047 C11orf84Q9BUA3 381 aaPredicted RBP8.72□□□□□ -1.01
CCDC7-208ENST00000537047 NKX2-4Q9H2Z4 354 aa8.72□□□□□ -1.01
CCDC7-208ENST00000537047 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
CCDC7-208ENST00000537047 K7ESM1 405 aa8.71□□□□□ -1.02
CCDC7-208ENST00000537047 NOP56O00567 594 aaKnown RBP8.71□□□□□ -1.02
CCDC7-208ENST00000537047 INSRRP14616 1297 aa8.71□□□□□ -1.02
CCDC7-208ENST00000537047 SF1Q15637 639 aaKnown RBP8.71□□□□□ -1.02
CCDC7-208ENST00000537047 C6orf15Q6UXA7 325 aaPredicted RBP8.71□□□□□ -1.02
CCDC7-208ENST00000537047 CD300LDQ6UXZ3 194 aa8.71□□□□□ -1.02
CCDC7-208ENST00000537047 ETV3LQ6ZN32 361 aa8.71□□□□□ -1.02
CCDC7-208ENST00000537047 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.02
CCDC7-208ENST00000537047 CNOT11Q9UKZ1 510 aaKnown RBP8.71□□□□□ -1.02
CCDC7-208ENST00000537047 POMZP3Q6PJE2 187 aa8.7□□□□□ -1.02
CCDC7-208ENST00000537047 TTLL7Q6ZT98 887 aa8.7□□□□□ -1.02
CCDC7-208ENST00000537047 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
CCDC7-208ENST00000537047 DCP2Q8IU60 420 aaKnown RBP8.7□□□□□ -1.02
CCDC7-208ENST00000537047 TGIF2Q9GZN2 237 aa8.7□□□□□ -1.02
CCDC7-208ENST00000537047 PALD1Q9ULE6 856 aa8.7□□□□□ -1.02
CCDC7-208ENST00000537047 SMAD7O15105 426 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms