RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CD99L2Q8TCZ2 262 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 LRRCC1Q9C099 1032 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 DHX36Q9H2U1 1008 aaKnown RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.52□□□□□ -1.05
YBX3-206ENST00000536823 BRD7Q9NPI1 651 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 SLC6A14Q9UN76 642 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 MYH1P12882 1939 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 ATAD5Q96QE3 1844 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 MYH7P12883 1935 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 A0A0G2JLL6 359 aaPredicted RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 GOLIM4O00461 696 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 TLR2O60603 784 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 ATP5JP18859 108 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 PRRT2Q7Z6L0 340 aaPredicted RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 MIGA1Q8NAN2 632 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 BHMTQ93088 406 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 MEGF10Q96KG7 1140 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 DNAJC18Q9H819 358 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.51□□□□□ -1.05
YBX3-206ENST00000536823 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 TRIM17Q9Y577 477 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 ZHX2Q9Y6X8 837 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 NAV1Q8NEY1 1877 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 ADGRA2Q96PE1 1338 aa8.51□□□□□ -1.05
YBX3-206ENST00000536823 LOC285556D6RIA3 1793 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 TNRC18O15417 2968 aaPredicted RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 MKI67P46013 3256 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 TCRBV5S4A2TA0A5A2 114 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 PDHXO00330 501 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 HLA-DOAP06340 250 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 SKIP12755 728 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 FSTP19883 344 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 RFX1P22670 979 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 CAP2P40123 477 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 USP5P45974 858 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 CAP1Q01518 475 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 RRP1BQ14684 758 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 CCDC84Q86UT8 332 aaPredicted RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 EDC3Q96F86 508 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 PARK7Q99497 189 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 HAUS7Q99871 368 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 RIOK1Q9BRS2 568 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 BOLA2Q9H3K6 86 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 IGFLR1Q9H665 355 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 EFCC1Q9HA90 598 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 PAG1Q9NWQ8 432 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 SAP30BPQ9UHR5 308 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 PALD1Q9ULE6 856 aa8.5□□□□□ -1.05
YBX3-206ENST00000536823 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
YBX3-206ENST00000536823 BRCA2P51587 3418 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 TRIM75PA6NK02 468 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 ATG7O95352 703 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 NOS2P35228 1153 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 RGS19P49795 217 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 ARHGEF6Q15052 776 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 TEAD4Q15561 434 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 PSAPL1Q6NUJ1 521 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 GADL1Q6ZQY3 521 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 FASTKD5Q7L8L6 764 aaKnown RBP8.49□□□□□ -1.05
YBX3-206ENST00000536823 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
YBX3-206ENST00000536823 PLPP7Q8NBV4 271 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 CEP63Q96MT8 703 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 CRNKL1Q9BZJ0 848 aaKnown RBP8.49□□□□□ -1.05
YBX3-206ENST00000536823 EHD4Q9H223 541 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 SCHIP1Q9P0W5 487 aaPredicted RBP8.49□□□□□ -1.05
YBX3-206ENST00000536823 ZNF232Q9UNY5 417 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 SLC45A1Q9Y2W3 748 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 ZSWIM8A7E2V4 1837 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 ZNF532Q9HCE3 1301 aa8.49□□□□□ -1.05
YBX3-206ENST00000536823 CEP290O15078 2479 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 BACH1O14867 736 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 ASNSP08243 561 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 ADD2P35612 726 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 GP2P55259 537 aaKnown RBP8.48□□□□□ -1.05
YBX3-206ENST00000536823 SOX10P56693 466 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
YBX3-206ENST00000536823 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 C17orf99Q6UX52 265 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 FOXP4Q8IVH2 680 aaPredicted RBP8.48□□□□□ -1.05
YBX3-206ENST00000536823 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 GPATCH3Q96I76 525 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 WDR18Q9BV38 432 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.48□□□□□ -1.05
YBX3-206ENST00000536823 ECHDC1Q9NTX5 307 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 CPA4Q9UI42 421 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms