RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
TNFRSF1A-207ENST00000535958 TANC1Q9C0D5 1861 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 FGRP09769 529 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 ESR2Q92731 530 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 FAM227BQ96M60 508 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 TTC14Q96N46 770 aa15.21■□□□□ 0.03
TNFRSF1A-207ENST00000535958 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 HSPD1P10809 573 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PHOSPHO2Q8TCD6 241 aa15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CERS4Q9HA82 394 aa15.2■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SCN10AQ9Y5Y9 1956 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 A6NJR5 290 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 BAIAP3O94812 1187 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PDE1AP54750 535 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 NMIQ13287 307 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PTGISQ16647 500 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CCDC178Q5BJE1 867 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CAGE1Q8TC20 777 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 COPS5Q92905 334 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 RILPL2Q969X0 211 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MUC3AQ02505 3323 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ABCB11O95342 1321 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 TLL1O43897 1013 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 GH1P01241 217 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 EDNRBP24530 442 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CDC37Q16543 378 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SEPT14Q6ZU15 432 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PPP1R13LQ8WUF5 828 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ZBED2Q9BTP6 218 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 KAT14Q9H8E8 782 aa15.18■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CHD9Q3L8U1 2897 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ZNF213O14771 459 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 GOLGA8HP0CJ92 632 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SNHG28P0DPA3 235 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 NT5C2P49902 561 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 RRP1P56182 461 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CHST3Q7LGC8 479 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ZNF589Q86UQ0 364 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 HERC6Q8IVU3 1022 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 NSUN6Q8TEA1 469 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ZKSCAN3Q9BRR0 538 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 COG5Q9UP83 839 aa15.17■□□□□ 0.02
TNFRSF1A-207ENST00000535958 RFXAPO00287 272 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PARNO95453 639 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MMP3P08254 477 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 TFF2Q03403 129 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 STXBP2Q15833 593 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 DGKHQ86XP1 1220 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 TBC1D10CQ8IV04 446 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 C7orf31Q8N865 590 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 PNMA1Q8ND90 353 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 RGS22Q8NE09 1264 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 AFG1LQ8WV93 481 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 KATNAL1Q9BW62 490 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 C1QTNF1Q9BXJ1 281 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 UBA5Q9GZZ9 404 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MAF1Q9H063 256 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MTCH2Q9Y6C9 303 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 NEDD4P46934 1319 aa15.16■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ARIH2O95376 493 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 DGKDQ16760 1214 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 ASPRV1Q53RT3 343 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 LRRC8DQ7L1W4 858 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 RMDN3Q96TC7 470 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MRPL11Q9Y3B7 192 aaKnown RBP15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
TNFRSF1A-207ENST00000535958 SELPP16109 830 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KCNQ1P51787 676 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TAP1Q03518 808 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 FBXO11Q86XK2 927 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 VWCEQ96DN2 955 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 NECAB3Q96P71 396 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 IWS1Q96ST2 819 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 CPVLQ9H3G5 476 aa15.14■□□□□ 0.01
TNFRSF1A-207ENST00000535958 LAMA4Q16363 1823 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 TCF20Q9UGU0 1960 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 EFCAB14O75071 495 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 KDM4AO75164 1064 aa15.13■□□□□ 0.01
TNFRSF1A-207ENST00000535958 PARP1P09874 1014 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms