RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CYLC1P35663 651 aaPredicted RBP14.67□□□□□ -0.06
LDLR-203ENST00000535915 TUBB4BP68371 445 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 ATP2B2Q01814 1243 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 MEA1Q16626 185 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 UBE2SQ16763 222 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 COBLL1Q53SF7 1204 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 MIIPQ5JXC2 388 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 FKBP15Q5T1M5 1219 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 USP40Q9NVE5 1235 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 ARFGEF1Q9Y6D6 1849 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 QSER1Q2KHR3 1735 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 PNMA6FA0A0J9YX94 578 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 MPHOSPH10O00566 681 aaKnown RBP14.67□□□□□ -0.06
LDLR-203ENST00000535915 ZBED6P86452 979 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 ZNF543Q08ER8 600 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 KRT79Q5XKE5 535 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 UNC13DQ70J99 1090 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 CERS5Q8N5B7 392 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 FUT8Q9BYC5 575 aa14.67□□□□□ -0.06
LDLR-203ENST00000535915 ZC3H12CQ9C0D7 883 aaKnown RBP14.67□□□□□ -0.06
LDLR-203ENST00000535915 ANKRD31Q8N7Z5 1873 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 CCDC66A2RUB6 948 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
LDLR-203ENST00000535915 EDIL3O43854 480 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 IPO7O95373 1038 aaKnown RBP14.66□□□□□ -0.06
LDLR-203ENST00000535915 RHOXF2BP0C7M4 288 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 IDEP14735 1019 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 SCNN1DP51172 638 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 PDIA5Q14554 519 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 CENPPQ6IPU0 288 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 TMC4Q7Z404 712 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 ZSCAN29Q8IWY8 852 aaPredicted RBP14.66□□□□□ -0.06
LDLR-203ENST00000535915 RHOXF2Q9BQY4 288 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 NHEJ1Q9H9Q4 299 aaPredicted RBP14.66□□□□□ -0.06
LDLR-203ENST00000535915 RIC8AQ9NPQ8 531 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 SUGT1Q9Y2Z0 365 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 PVALEFA0A1B0GWK0 134 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 ENC1O14682 589 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 NKRFO15226 690 aaKnown RBP eCLIP14.66□□□□□ -0.06
LDLR-203ENST00000535915 AMPD2Q01433 879 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 NCAPH2Q6IBW4 605 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 MSANTD4Q8NCY6 345 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 ERGIC2Q96RQ1 377 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 PNKPQ96T60 521 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 ATP6V0A2Q9Y487 856 aa14.66□□□□□ -0.06
LDLR-203ENST00000535915 PSMD14O00487 310 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 KRT86O43790 486 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 PPP1R11O60927 126 aaPredicted RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 SLC16A2P36021 539 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 SMC1AQ14683 1233 aaKnown RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 PPP1R18Q6NYC8 613 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 RAD54LQ92698 747 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 CUL5Q93034 780 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 JAKMIP2Q96AA8 810 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 KLRG2A4D1S0 409 aaPredicted RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 MARCH6O60337 910 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 SHMT1P34896 483 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 SLC27A3Q5K4L6 730 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 KCTD1Q719H9 257 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 DDX25Q9UHL0 483 aaKnown RBP14.65□□□□□ -0.06
LDLR-203ENST00000535915 AFF2P51816 1311 aa14.65□□□□□ -0.06
LDLR-203ENST00000535915 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 FAM193AP78312 1265 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 CCDC170Q8IYT3 715 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 RAB21Q9UL25 225 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 A0A1W2PQJ5 194 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 G3V3G9 751 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 ONECUT3O60422 494 aaPredicted RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 ERLIN1O75477 346 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 MRPL12P52815 198 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 FIGNQ5HY92 759 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 PPP4R3AQ6IN85 833 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 TRAPPC11Q7Z392 1133 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 GUF1Q8N442 669 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 EHBP1Q8NDI1 1231 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 HNRNPLLQ8WVV9 542 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 DDX12PQ92771 950 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
LDLR-203ENST00000535915 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 HDAC6Q9UBN7 1215 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 MYH10P35580 1976 aa14.64□□□□□ -0.07
LDLR-203ENST00000535915 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
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