RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 GALNT18Q6P9A2 607 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 WAPLQ7Z5K2 1190 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 CABP7Q86V35 215 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 TP53INP2Q8IXH6 220 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 AHI1Q8N157 1196 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 AFAP1Q8N556 730 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 BCL7CQ8WUZ0 217 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 PTPRN2Q92932 1015 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 ALPK1Q96QP1 1244 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 MMP19Q99542 508 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 ALG1Q9BT22 464 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 TBX22Q9Y458 520 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 NPHP3-ACAD11A0A0J9YXS1 232 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 PRODHO43272 600 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 MAFKO60675 156 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 AFMP43652 599 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 CD97P48960 835 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 SNW1Q13573 536 aaKnown RBP4.61□□□□□ -1.67
SNHG1-202ENST00000535689 LRP8Q14114 963 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 DPY19L1Q2PZI1 675 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 OLFML2BQ68BL8 750 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 SPATC1Q76KD6 591 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 IFNL3Q8IZI9 196 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 PDZD8Q8NEN9 1154 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 DIO2Q92813 273 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 RNPC3Q96LT9 517 aaKnown RBP4.61□□□□□ -1.67
SNHG1-202ENST00000535689 IER2Q9BTL4 223 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 FOXP3Q9BZS1 431 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 PIF1Q9H611 641 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 ATP13A1Q9HD20 1204 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 INTS7Q9NVH2 962 aaKnown RBP4.61□□□□□ -1.67
SNHG1-202ENST00000535689 FANCLQ9NW38 375 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 APEX2Q9UBZ4 518 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 CCDC39Q9UFE4 941 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 TMEM59LQ9UK28 342 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 GPR55Q9Y2T6 319 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-202ENST00000535689 PTCH2Q9Y6C5 1203 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 MLH3Q9UHC1 1453 aa4.61□□□□□ -1.67
SNHG1-202ENST00000535689 VAMP4O75379 141 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 L1CAMP32004 1257 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 LTBRP36941 435 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 ECI1P42126 302 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 GFRA1P56159 465 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SCRN1Q12765 414 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 LAPTM5Q13571 262 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 TESK1Q15569 626 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 CHRNA2Q15822 529 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 GIMAP6Q6P9H5 292 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 CRTC3Q6UUV7 619 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 UBE2R2Q712K3 238 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SHISA5Q8N114 240 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 LILRB2Q8N423 598 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 BTN2A2Q8WVV5 523 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 COPS5Q92905 334 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 MAGEB10Q96LZ2 347 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 FCRL3Q96P31 734 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SLC12A9Q9BXP2 914 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 CARS2Q9HA77 564 aaKnown RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 GPR27Q9NS67 375 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 MRPS23Q9Y3D9 190 aaKnown RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 PCDHA11Q9Y5I1 949 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 MRPL42Q9Y6G3 142 aaKnown RBP4.6□□□□□ -1.67
SNHG1-202ENST00000535689 CLIP1P30622 1438 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SHANK2Q9UPX8 1470 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SIGLEC1Q9BZZ2 1709 aa4.6□□□□□ -1.67
SNHG1-202ENST00000535689 SHISA3A0PJX4 238 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 FGF10O15520 208 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 FAM153BP0C7A2 387 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 SPINK2P20155 84 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 FUT4P22083 530 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 SSTR4P31391 388 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 GDNFP39905 211 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 RPL11P62913 178 aaKnown RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 TEKQ02763 1124 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 TCOF1Q13428 1488 aaKnown RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 PLCL1Q15111 1095 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 NR0B2Q15466 257 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 KIZQ2M2Z5 673 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 FAM47CQ5HY64 1035 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 ZNF772Q68DY9 489 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 GGT6Q6P531 493 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 EP400NLQ6ZTU2 488 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 NBPF11Q86T75 865 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 PPIL6Q8IXY8 311 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 ZNF513Q8N8E2 541 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 NLGN2Q8NFZ4 835 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 PTCHD1Q96NR3 888 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 PRXQ9BXM0 1461 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 ARHGEF4Q9NR80 690 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 MAGEC2Q9UBF1 373 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 SFMBT1Q9UHJ3 866 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 ADGRE2Q9UHX3 823 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 NUDT5Q9UKK9 219 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-202ENST00000535689 TAF6LQ9Y6J9 622 aa4.59□□□□□ -1.67
SNHG1-202ENST00000535689 POLR1AO95602 1720 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-202ENST00000535689 ZNF142P52746 1687 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms