RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MORC2Q9Y6X9 1032 aaPredicted RBP7.7□□□□□ -1.18
USP28-202ENST00000535607 PTPRCP08575 1304 aa7.7□□□□□ -1.18
USP28-202ENST00000535607 CCDC171Q6TFL3 1326 aa7.7□□□□□ -1.18
USP28-202ENST00000535607 PARP4Q9UKK3 1724 aaKnown RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 VAMP4O75379 141 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 FGRP09769 529 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 SDSP20132 328 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 CLCQ05315 142 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 EIF4A2Q14240 407 aaKnown RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 TEX35Q5T0J7 233 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 MCF2L2Q86YR7 1114 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 DRC7Q8IY82 874 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 ZGPATQ8N5A5 531 aaKnown RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 ZNF397Q8NF99 534 aaPredicted RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 GIMAP7Q8NHV1 300 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 IL17RAQ96F46 866 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 EHMT1Q9H9B1 1298 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 DISC1Q9NRI5 854 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 ZNRF3Q9ULT6 936 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
USP28-202ENST00000535607 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 PCDHGC5Q9Y5F6 944 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 RGS12O14924 1447 aa7.69□□□□□ -1.18
USP28-202ENST00000535607 SLIT2O94813 1529 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 ATE1O95260 518 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 BMP3P12645 472 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 RAG1P15918 1043 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 GATA4P43694 442 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 ATP2B3Q16720 1220 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 TWISTNBQ3B726 338 aaPredicted RBP7.68□□□□□ -1.18
USP28-202ENST00000535607 HSP90AB2PQ58FF8 381 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 PAOXQ6QHF9 649 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.68□□□□□ -1.18
USP28-202ENST00000535607 PHACTR4Q8IZ21 702 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 DCAF5Q96JK2 942 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 TRIM55Q9BYV6 548 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 GMIPQ9P107 970 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 CORINQ9Y5Q5 1042 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 MRVI1Q9Y6F6 885 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 AOX1Q06278 1338 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 WNK3Q9BYP7 1800 aa7.68□□□□□ -1.18
USP28-202ENST00000535607 PKD1L3Q7Z443 1732 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 RGPD5Q99666 1765 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 ZSCAN22P10073 491 aaPredicted RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 PDCP20941 246 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 BMS1Q14692 1282 aaKnown RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 SLC6A19Q695T7 634 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 Q6ZS46 218 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 DHX38Q92620 1227 aaKnown RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 ISL2Q96A47 359 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 FAM46AQ96IP4 442 aaKnown RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 MYRFLQ96LU7 910 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 ZSCAN31Q96LW9 406 aaPredicted RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 TTC12Q9H892 705 aaPredicted RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 ARGLU1Q9NWB6 273 aaPredicted RBP7.67□□□□□ -1.18
USP28-202ENST00000535607 WDR17Q8IZU2 1322 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 CRB1P82279 1406 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 LRP6O75581 1613 aa7.67□□□□□ -1.18
USP28-202ENST00000535607 FAM95CA0A1B0GW59 222 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 GOLGA6L4A6NEF3 574 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 CCP110O43303 1012 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 TPM1P09493 284 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 FBLN1P23142 703 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 U2AF2P26368 475 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP28-202ENST00000535607 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 CCT4P50991 539 aaKnown RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 GPS2Q13227 327 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 PKP1Q13835 747 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 TPD52L1Q16890 204 aaPredicted RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 CTR9Q6PD62 1173 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 FBLIM1Q8WUP2 373 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 TMEM40Q8WWA1 233 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 TMEM87BQ96K49 555 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 CWC15Q9P013 229 aaKnown RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 NAP1L2Q9ULW6 460 aaPredicted RBP7.66□□□□□ -1.18
USP28-202ENST00000535607 SMC3Q9UQE7 1217 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 SLC12A7Q9Y666 1083 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 OVOS2A0A0G2JMS6 1433 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 LRRC37A3O60309 1634 aa7.66□□□□□ -1.18
USP28-202ENST00000535607 KRBA1A5PL33 1030 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 NFICP08651 508 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 TNNT1P13805 278 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 HSPA1LP34931 641 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 CHRNA4P43681 627 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 TPM4P67936 248 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 RASSF7Q02833 373 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 RING1Q06587 406 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 SGO2Q562F6 1265 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 TAF7LQ5H9L4 462 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 TMEM201Q5SNT2 666 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 CD163Q86VB7 1156 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 SIRT2Q8IXJ6 389 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 FBXO41Q8TF61 875 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 TP53INP1Q96A56 240 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms